Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06468 ATGAAGCTCAAAGTGTATGCAGACCGTATGTCCCAGCCATCCCGTGCGGTTCTTATCTTCTGCAAGGTAAATGGAATAGATTTTGAGGAGATCAAAGTGGAACTATCCAAACGTCACCAGTTATCTCCTGAATTTCAAGCGATTAACCCTTTCAAGAAAGTCCCTGCTATTGTTGATGGAAGGTTCAAACTATTTGAGAGTCATGCAATTCTTATCTATCTTGCTTCTGCCTTTCCAGGAGTTCCAGACCATTGGTACCCAGCTGATCTTTCCAGGAGAGCTAGAGTTCATTCTGTGTTAGATTGGCATCACCTGAATTTGCGCCGTGGAGCAGCCGGATATGTTCTAAATACTGTACTAGCTCCATTATTGGGTCTGCCACTAAACCAACAAGCAGCTACTGAAGCCGAGAAAACTTTGATATCATCTCTGTCCAAAATAGAGAACATTTGGCTTAAGGGGAACGGAAAGTACTTGCTTGGTGGCTTGCAACCGTCAATAGCAGATCTTAGTCTGGTTTGTGAAATAATGCAATTAGAGCTTTTAGATGAGAAAGATCGTTATCGTATTCTTGGCCCGCACAAGAAAGTTCAGCAGTGGATTGAGAGCACAAGAAATGCAACGAGGCCTCATTTTGATCAAGTTCATAATGTCCTTTTTAAGCTCAAAATGAAGCTTTCAGTACAGCAATCTAGTCAGGAAGGCATAATGGAATCTAGGACGAAAGCCCCACTAACTTCAAAGATGTTTAACGGAATCGACTTCGACGAGATTAAAGTTGACATTTCCAAACGTCACCATCTGTCTCCTCAATTCACAGAAGTAAACCCTATGCAGAAAGTTCCAGCTATTGTTCATGGAACCTTCAATCTCTTCGAGAGCCATGCAATCCTTGTCTATCTTGCTTCTGCTTTTCCTGGAATTGCAGACCATTGGTATCCAACTGATCTTTTCAAAAGAGCCAAAATTAACTCAGTATTGGATTGGCATCACTCTAATTTACGACACGGAGCAGTGAACTATGTAATAAATACTGTATTAGGACCTGCACTTGGCCGTCCTCTGAATCCAAAAGCAGCTGCTGAAGCAGAGAAAGTTTTACTATCTTCTTTATCAAAACTAGAAGATTTTTGGCTCAATGGAGATGGGCGCTTCCTGCTTGGTGGCTTTCAACCGTCCATAGCAGATCTCAGCCTGGTTTGTGAACTCATGCAACTTGAGGTTTTGGATGAGAAGGATCGCGATCGTATATTATCCCCATACAAGAAAGTTCTACAGTGGATTGAGGATACAAGAACTGCAACAAATCCCCACTTTGAAGAAATGCATAATATCCTTTATAGAGCTAAAAAGAAATTCCAACAGGAGCGTTCAAGGGTAGCTGAAACTGGGACTGAGCCAAGCAACAAGAAGGGGGGACATTCTAGGATGTGA 1434 0.4212 MKLKVYADRMSQPSRAVLIFCKVNGIDFEEIKVELSKRHQLSPEFQAINPFKKVPAIVDGRFKLFESHAILIYLASAFPGVPDHWYPADLSRRARVHSVLDWHHLNLRRGAAGYVLNTVLAPLLGLPLNQQAATEAEKTLISSLSKIENIWLKGNGKYLLGGLQPSIADLSLVCEIMQLELLDEKDRYRILGPHKKVQQWIESTRNATRPHFDQVHNVLFKLKMKLSVQQSSQEGIMESRTKAPLTSKMFNGIDFDEIKVDISKRHHLSPQFTEVNPMQKVPAIVHGTFNLFESHAILVYLASAFPGIADHWYPTDLFKRAKINSVLDWHHSNLRHGAVNYVINTVLGPALGRPLNPKAAAEAEKVLLSSLSKLEDFWLNGDGRFLLGGFQPSIADLSLVCELMQLEVLDEKDRDRILSPYKKVLQWIEDTRTATNPHFEEMHNILYRAKKKFQQERSRVAETGTEPSNKKGGHSRM. 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06468 477 SFLD Glutathione Transferase (cytosolic) 252 431 IPR040079 -
Seca12g06468 477 CDD GST_C_Theta 319 448 IPR040077 -
Seca12g06468 477 CDD GST_C_Theta 92 222 IPR040077 -
Seca12g06468 477 SUPERFAMILY Thioredoxin-like 250 308 IPR036249 -
Seca12g06468 477 SUPERFAMILY GST C-terminal domain-like 310 433 IPR036282 -
Seca12g06468 477 MobiDBLite consensus disorder prediction 456 477 - -
Seca12g06468 477 Pfam Glutathione S-transferase, N-terminal domain 250 302 IPR004045 -
Seca12g06468 477 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Seca12g06468 477 Gene3D Glutaredoxin 241 308 - -
Seca12g06468 477 Gene3D Glutaredoxin 1 81 - -
Seca12g06468 477 FunFam Glutathione S-transferase theta-1 310 458 - -
Seca12g06468 477 Gene3D - 82 240 - -
Seca12g06468 477 Gene3D - 309 465 - -
Seca12g06468 477 FunFam Glutathione S-transferase theta-1 83 231 - -
Seca12g06468 477 SUPERFAMILY GST C-terminal domain-like 83 217 IPR036282 -
Seca12g06468 477 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 316 453 IPR010987 -
Seca12g06468 477 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 251 309 IPR004045 -
Seca12g06468 477 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 245 IPR010987 -
Seca12g06468 477 CDD GST_N_Theta 3 78 IPR040075 -
Seca12g06468 477 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 234 IPR043377 -
Seca12g06468 477 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Seca12g06468 477 SFLD Main (cytGST) 1 229 - -
Seca12g06468 477 SFLD Main (cytGST) 252 431 - -
Seca12g06468 477 SFLD Main.4: Theta-like 1 229 - -
Seca12g06468 477 SUPERFAMILY Thioredoxin-like 1 87 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06468 Seca-Chr12 156719380 156738866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06468 237 465 Glutathione S-transferase Gene Family AT5G41210 63.755 2.49e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06468 K00799 - gmx:547979 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06468 12 156719380 156738866 Seca12g06468 12 156719380 156738866 ECH