Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06420 ATGGATTTTGTGAAGAAGTGTAAGAAGGTATGGGGAATTAGCAGCAAGAGATTGCACCCTGCAGAAGACAGTGGCAGCTACGGCAAATTATCATCAAAGAAAAAGGCTCCGCATGGTTATCTTTCGGTGTACGTTGGGCCAGAGAGACAGAGATTCGTAATAAAAATAAAAATCGCGAACCACCCTTTGTTCAAGACGCTTTTGGACGCTGCTGAGAAAGAACATGGATATACAAACGATGGTCCTCTTTGGCTTCCTTGCGACGTTGATTTCTTCTGTGAGGCATTGGCGGAGATGGAGGATATGAGTTCTGTAGGTTGCGCCTTTCCCATAGGTCAGTCTCAGACACTCTCCATTGTCTAA 363 0.4518 MDFVKKCKKVWGISSKRLHPAEDSGSYGKLSSKKKAPHGYLSVYVGPERQRFVIKIKIANHPLFKTLLDAAEKEHGYTNDGPLWLPCDVDFFCEALAEMEDMSSVGCAFPIGQSQTLSIV. 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06420 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 96 IPR003676 GO:0009733
Seca12g06420 120 Pfam Auxin responsive protein 15 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06420 Seca-Chr12 156229740 156230102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06420 37 110 Calmodulin-binding Proteins AT4G34750 42.857 1.76e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06420 K14488 - gmx:102667331 129.413