Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06332 ATGTTACAATGTATGTCAGGTGAATTGGTTAATTTGTTTTACTGTGTGATGATGGAGGGTAACACTGATGATGTTTCTAATGGTCCTGTTGGGGCGGAAGACATTGAAAATGAATATGAGGATGCAATGGTATTTGAAAATGAGGATATGGGGTTTGGAATTGATTGTGAGGATGACTTCATAAATATTGACCCTGGGATGCTAGGTGTGGATGTTGTCATGAAGTTTCATTTTGCTAACATTGATAAGGCATATGAATTTTATAATTGGTATGGTTTAATGAAAGGAATTTCAGCTCGTAGAAGTAAGGTGGGAAAGAATAAGGGTGATGAAATTATTGAGAAGACCTTTCTTTGTCATAGAGAAGGAAAGCGGGTGAAAAATGATAAAGGTGACATGGAGATGGAAAAAAATGACAAAGGAAAAGGAAAAACGCCACGGGAAGCCAAGCCTGAAACAAGATGGATGTTGCCTGCTCATAGAAGAATCAATGAATCTGACAAAATGCAAATGAGCGACATGTGGGATGCTAGTATTAGCACACCACAAATTTATGGCTCATTTGCATGCCAATCTGGTGGTTTTGAGCATATTGGATTCCGAAAGAAAGACATGTACAATGAACTTTCAAGGAAAAGGAAATTGCATGGTTCTGATGTGGAGGCAACACTTAAGTACCTTCGTCGAATGAAATCCAATGACCCCACTTTTTTTTGGAGGCACAAAGTTGATGATGAAGGTCGACTTCAACGCCTATTTTGGTGTGATGGTCATAGTCAGGTCGACTATAAACTATTCGGTGATGTTATCGCATTTGATGCAACTTATCAAAAGAATAGACATCACTTTCCATTAGTTGTATTTTCTGGTATTAACCATCACAACCAAAGTACAATATTTGCAAGTTGTCTAGTTACAGATGAAACTAAAGAAACATATGTATGGTTACTTGAACAATTAATGGTGGTAATGAAAAGGAAAATGCCTTCGTCAGTTATCACAGATGGTGACCTTGCAATGAAGAATGCCATTAGAAGGATTTTTCCAAATGCACATCATATACTATGTGCATGGCATCTTTCCCGTAATGCTGTTAGCAATGTCAAAAATCCAAAAATGCTAGCTCAATTTAAAAAATGCATGCTGGGTGATTATGACATTTCTCAATTTCATTGTAGATGGGAGCGGATGGTAAAGGAATTCGGACTTGAGGAAAATAGTTGGGTCAAAGAAATGTATGACAAGAGAAATGTGTGGGCAACAACATATATTAAGGGGAACTTTTTTGCAGGTTTTAGGACAACATCTCGGTGCGAGGGGTTGAATGCACAACTTGCAAGGTTTGTACACTCCCGTCACAAGCTAATTGATTTTTTGCACAACTTTGTTCGATGTCTTGAAGCACTTCGATATAAAGAGATTGAAGCTGATTTTGCATCTGCCCACGGTGAGGTGGTTTTGCAAACCAACTTGAAAGATTTGGAGAGGTCGGCCTCGAAAATGTTCACAAGGGAAGTTTTCATGTTAGTTCATCCGGCAATTGCAAGGGGAAGCACCATTAGGGTTAAAAATTGTACACAATTGATGTCACAATCAATCTACACAATTTCCAAATATGGTAGACCAAACAAACAGTGGCATGTGTCATTTTTGGAGAGTCCGATGCACATTAAGTTTTCTTGTCAAATGATGGAAACATTTGGACTCCCATGTGATCACATCATAGGTATCATGGTGCATCTAAACATTGAGGAGTTACCAAGGTGTCTTGTGCTTGATAGATGGACTATGGGAGTAAAGGATAAGTTGTATGAGATTACTGATAATCGCAGCACCATATGGGACTCTGTTTACATGGCTCGTTGTGCAGCCTTGGATTTTTTGTGTAAGAAGATGAACAAAAAGGCTGGTCAGTCATCAAAGACATTTAATGTTGTTAGAGATTTGGTGACGCGTCAAATCGAGTTGATGAATTTAGAGGATGCATCGGACATGGATGGTAATGACAACCAACATGAAACTGGTGGTGAAATTTTGAGGGACCCGATTAGAGTTGGAACCAAGGGTTATGGTGTTAGTAACTCATCACAATCAACAAGGCGTCGTCATAAATGTAGCAAAGGTGGAGGGGTTGGTCATAATCGAACAACATGCACTAAACAACGAGGTGATGATCACATGCCTATATTCCCTAATGAGGACGACATTAATTTCAATGATGAGATGGATGCAGATGTTTGCACTGATACGAATGTTGATATATGA 2265 0.3881 MLQCMSGELVNLFYCVMMEGNTDDVSNGPVGAEDIENEYEDAMVFENEDMGFGIDCEDDFINIDPGMLGVDVVMKFHFANIDKAYEFYNWYGLMKGISARRSKVGKNKGDEIIEKTFLCHREGKRVKNDKGDMEMEKNDKGKGKTPREAKPETRWMLPAHRRINESDKMQMSDMWDASISTPQIYGSFACQSGGFEHIGFRKKDMYNELSRKRKLHGSDVEATLKYLRRMKSNDPTFFWRHKVDDEGRLQRLFWCDGHSQVDYKLFGDVIAFDATYQKNRHHFPLVVFSGINHHNQSTIFASCLVTDETKETYVWLLEQLMVVMKRKMPSSVITDGDLAMKNAIRRIFPNAHHILCAWHLSRNAVSNVKNPKMLAQFKKCMLGDYDISQFHCRWERMVKEFGLEENSWVKEMYDKRNVWATTYIKGNFFAGFRTTSRCEGLNAQLARFVHSRHKLIDFLHNFVRCLEALRYKEIEADFASAHGEVVLQTNLKDLERSASKMFTREVFMLVHPAIARGSTIRVKNCTQLMSQSIYTISKYGRPNKQWHVSFLESPMHIKFSCQMMETFGLPCDHIIGIMVHLNIEELPRCLVLDRWTMGVKDKLYEITDNRSTIWDSVYMARCAALDFLCKKMNKKAGQSSKTFNVVRDLVTRQIELMNLEDASDMDGNDNQHETGGEILRDPIRVGTKGYGVSNSSQSTRRRHKCSKGGGVGHNRTTCTKQRGDDHMPIFPNEDDINFNDEMDADVCTDTNVDI. 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06332 754 PANTHER OS01G0519700 PROTEIN 73 694 - -
Seca12g06332 754 MobiDBLite consensus disorder prediction 687 729 - -
Seca12g06332 754 MobiDBLite consensus disorder prediction 128 151 - -
Seca12g06332 754 Pfam MULE transposase domain 269 363 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06332 Seca-Chr12 155226445 155228914 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g06332 MULE 7e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06332 - - tpra:123913749 631.328