Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06322 ATGTCTGTGCCTCCAAGCAGTGCCTTGTGCCTTTCCCAGGCCACTGAACACAGTAATTTTGAGGGTGAAAGCTTCCACAAGTTTTTTGATTGTTGGCTTGCTGAGCAAAACCAACATCTGAATGACCTTATAGAAGCTGAATCAAAATCAAATCAGGTTCCAAGTGAGAGAGCACAAGCACTGATTGAGAAGGTGATTGATCATTATGAGTTATACTACAAGGCTAAGTCAAGGTGGGCAAAACATGATGTTCTTGCCATGTTGTCCCCATCTTGGAGGAGCTCTTTAGAAGAGGCTTTTCTTTGGATTGGTGGGTGGAGACCTAGCATGGCATTCCACTTGCTATATTCCAAATCAAGCTTGCAATTTGAGGCCAGGTTGAATGAACTTATTCAAGGGATAAGAACATGTGACCTGGGGGATCTGTCAGCTGCTCAACTTTCTGAGTTTGATGATATGCAAAGAAGGGCCATCAAAGAGGAGAGAGAAATCACAGATATGATGGCAAAGCATCAGGAAACAGTGGCTGATGCTCCAATGGTGGAGTTATCTCATGTGGTTACTGAGATGATTAGAGCTAATGAAAGTGGAGAGAGTGAGAATAAGGAATTAGAAGACAAAATTGAGTCAACTCTGGAGCCAAAGGTGGAAGGTCTAGAGAAGATCCTGCACAAAGCTGATGATCTAAGGCTGAGAACATTGCAGGGCATTGTCAATATTCTGAGTCCACAACAGGCTATCCATTTCTTAATTGCTGCTGCAGAGCTTCACCTGAGGCTACATGAATGGGGCAAGAAGAAAGATGCCAAAAAGGCAAATTAA 822 0.4319 MSVPPSSALCLSQATEHSNFEGESFHKFFDCWLAEQNQHLNDLIEAESKSNQVPSERAQALIEKVIDHYELYYKAKSRWAKHDVLAMLSPSWRSSLEEAFLWIGGWRPSMAFHLLYSKSSLQFEARLNELIQGIRTCDLGDLSAAQLSEFDDMQRRAIKEEREITDMMAKHQETVADAPMVELSHVVTEMIRANESGESENKELEDKIESTLEPKVEGLEKILHKADDLRLRTLQGIVNILSPQQAIHFLIAAAELHLRLHEWGKKKDAKKAN. 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06322 273 ProSiteProfiles DOG1 domain profile. 22 270 IPR025422 GO:0006351|GO:0043565
Seca12g06322 273 Pfam Seed dormancy control 40 117 IPR025422 GO:0006351|GO:0043565
Seca12g06322 273 Coils Coil 187 207 - -
Seca12g06322 273 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 23 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06322 Seca-Chr12 155115358 155122757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06322 24 260 Calmodulin-binding Proteins AT1G77920 26.141 1.04e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06322 - - cam:101504084 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06322 12 155115358 155122757 Seca12g06322 12 155115358 155122757 ECH