Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06320 ATGATTTCATCCCAATTGGCAAGTCTCTTACTTCAGTTCTTCATAATGAGTAACAGTGCCCTAGTTGGTAGCAGATCCTTTGCAGACCCTTTGACTAGAAAATGCTTTAGCAAGCAACTTCACTTCCACTCCCGCTGTGTTGTTTTCTCTTCATACTCATGTTCTGCAACTCTATCAGTGGTGCCAGAATTAGAAGAGAAGCAAGTATTTGATGGGGAGAAGGCTGCTATACTCGTTAAAGAGCTAAGAAAGAGCTTTGATTCAGGCAAGACAAAGAGCTATGAATGGCGGATTTCCCAATTGGAGGGCATAGCTAAGATGCTAGAAGAGAAAGAGAAGGAAATTACTATAGCTCTTGATAAGGACCTTTCTAAACCTGGACTTGAAGCATTTATAACTGAGATTTCCCAGGCAAAATCTTCATGTAGTGAAGCAATTCAAGAACTGAAACACTGGATGAAGCCTGAAAAGGTGAATACTTCAATCACAACATTTCCATCATCAGCAGAGATTGTGTCAGAACCACTAGGAGTTGTGTTGGTCATCTCAACATGGAACTTTCCTTTTTTGTTATCAATGGATCCAGTCATTGGAGCCATTTCAGCGGGTAATGCAGTGGTTCTGAAACCATCAGAAATTTCTCCAGCAACGTCATCACTGCTTGCAAATTTGCTCGAAAATTATCTAGACAACTCTGCCATAAGAGTTGTTGAAGGGGCTATTCCTGAAACAACTGCACTCCTAGAGCAGAAATGGGATAAGATACTTTACACTGGTAGTGCTAGAGTAGGTCGCATTGTCATGGCTGCTGCTGCGAAGCATCTTACGCCAGTGGTTCTGGAACTTGGAGGGAAGTGCCCAGCTGTTGTTGATTCAGATGTCAACTTACAAGTTACTGCTAGAAGGATAATAGGTGGCAAGTGGGCATGCAACAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAGAAAAGAATTTGCTCCATCATTGATAAATGCTTTAAAAGAAGAATTGGAGCAATGTTTTGGGAAAGATCTGATGGAATCCAAAGACATGTCACGTATTGTGTCTCCAGCCCAATTTGCACGACTTGTGAAGCTCTTGGATGAGGATAAGGTATCTGACAAAATTGTTTTAGGAGGTCAGAGGGATGAGAAGAAATTAAAGATTGCTCCAACTATCCTATTGGATGTTCCAGAAGAAGCTATGGTAATGCAAGAGGAGATATTTGGACCAATACTGCCAATTATCACTGTGAGTACTAGATCACAACAGCAAAGTACATTTAGGACTTGA 1302 0.4109 MISSQLASLLLQFFIMSNSALVGSRSFADPLTRKCFSKQLHFHSRCVVFSSYSCSATLSVVPELEEKQVFDGEKAAILVKELRKSFDSGKTKSYEWRISQLEGIAKMLEEKEKEITIALDKDLSKPGLEAFITEISQAKSSCSEAIQELKHWMKPEKVNTSITTFPSSAEIVSEPLGVVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEISPATSSLLANLLENYLDNSAIRVVEGAIPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVVLELGGKCPAVVDSDVNLQVTARRIIGGKWACNSGQACISVDYIITRKEFAPSLINALKEELEQCFGKDLMESKDMSRIVSPAQFARLVKLLDEDKVSDKIVLGGQRDEKKLKIAPTILLDVPEEAMVMQEEIFGPILPIITVSTRSQQQSTFRT. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06320 433 FunFam Aldehyde dehydrogenase 83 287 - -
Seca12g06320 433 PANTHER ALDEHYDE DEHYDROGENASE 74 423 IPR012394 GO:0006081
Seca12g06320 433 Pfam Aldehyde dehydrogenase family 73 425 IPR015590 GO:0016491
Seca12g06320 433 PIRSF ALDH 59 432 IPR012394 GO:0006081
Seca12g06320 433 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 83 283 IPR016162 GO:0016491
Seca12g06320 433 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 284 424 IPR016163 GO:0016620
Seca12g06320 433 SUPERFAMILY ALDH-like 78 424 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06320 Seca-Chr12 155102717 155108025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06320 52 421 Aldehyde Dehydrogenase Gene Family AT4G34240 70.811 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06320 K00128 - gmx:100800699 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06320 12 155102717 155108025 Seca12g06320 12 155102717 155108025 ECH