Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06293 ATGGCAGATTCCAAAAATGAAGTACAAGATATAGTATGTTATTCACCATTTATGATAACAACAAATGGGATATGGCAAGGAGATAACCCTTTAAACTATTCTCTCCCTCTCTTAATCCTTCAAGTCATGTTAGTTGTGATTGCCACCCGCATATTTGTCTTCATACTCAAGCCTATTCGCCAGCCACGTGTTATTGCTGAAATCTTGGGAGGAATACTATTAGGTCCTTCTGTGCTTGGAAGAAACAAAACATTTGCTGATGCAGTATTTCCCTTAAGAAGTGTGATGGTGATTGAAACAATGGCAAATGTTGGTCTCCTATATTTTCTGTTCTTGGTGGGAGTGGAGATGGATGTATCTTCATTAAGAAGGGTAGGTAGAAAGGCAGTGGCCATAGCAATTGCTGGTATGATCATGCCTTTTGCCATTGGAGCTATCTTTTCCATCCTTTGGCTAAATAACACTGATCATGGTATTAGGAAAGGTGCTTTCATCCTATTGCTTGGTGTTATTCTCTCTGTTACAGCATTCCCTGTGCTTGCTAGGATCCTTGCTGAGCTTAAACTTGTCAACACAGAGATAGGAAGGGTTGCTCTTTCATCTGCACTTATTAATGATATGTGTTCTTGGATACTCTTGGCTATAGCCATTGCTGTGTCTGAGCATGAAAAACCTACTTTTGCTTCCTTAATGGTTCTGTTGTCAAGTGTAGCATTTGTGGCCTTTCATATTTTTATTGTGAAACCAGCAATCTTTTGGATAATAAGGAAAACCCCAGAAGGTGAAACATTCAGTGATTTCTATATTTGTTTGATACTAGCAGGTGTTATGATCTCAGGTTTCATGACAGATTTTATTGGAACACATTCTGTTTTTGGAGCTTTTGTGTTTGGTATGACAATCCCACATGGACCACTTGCTCTAGCTCTTGTAGAAAAGCTTGAGGACTTTGTTTCAGGACTTTTGCTCCCTCTCTTTTTTGCCATTAGTGGGCTAAAGACTAATATAGCCCTTGTCACAGGGTTCTTCACATGGGGAACTTTGATCCTTCTGGTTGTTCTGGCTTGCATTGGAAAAATAGCTGGAACTATAATTGCTGCAGTCTATTATCAAATGTCACTTACTGAAGGAGCTGCCCTTGGTTTGCTCATGAACACAAAAGGCCTTGTTGAAGTTATCTTGCTTAATATTGGTAGGGATTCAAAGCTTTTGGATGAAGGATCATTTGCAATCATGGTGATTATGACTGTGCTAATGACTGCAATAATTGTTCCTGGCATATCAGCTATATACAAACCATCATCAAAGGGGTTCATATCTTATAAAAGAAGAACCATTCAAATGTCAAAAAAGGATGCAGAGTTTAGAGTCCTAGTGTGTATCCATACCCCTAGGAATGTCCCTACAATGATCAACCTCCTTGAAGCCTCTAATCCAACAAAGAAGTCACCAATTTGCATCTATGTGCTTCATTTGGTTGAACTTTCTGGTCGTACATCTGCATTGCTCATTGTCCATAACTCTACAAGACCAGATCACCCTGCCCTTAATAGGACTAGAGCTCAATCTGATCACATAATCAATGCCTTTGAAAACTATGAACAACATGCTGATCATGTTTCTGTCCAACCCTTAACAGCAATCTCCCCTTACTCCACCATGCATGAGGATATATGCAATTTGGCTGAGGACAAACGTGTTGCCTTCATAATCATTCCTTTTCATAAACAACAAACAGTTGATGGTGGAATGGAAGTTACAAACATGGCATTTCGCACTGTCAACCAAAATGTGCTAGCTAATGCACCTTGCTCAGTTGGGATTCTAGTGGATAGAGGCTTAAATGGCTCTAACCGTATGGCTGCAGATCAAGTTTGTCATAATGTGGCAGTTTTGTTTTTTGGAGGGCCAGATGATAGAGAAGCATTGAGTTATGGATGGAGAATGTCAGAACATCAAGGGATAAGTCTTACTGTGATGCGTTTTGTTCCAGGTGAAGATATTGTTGGACCAAGGATGAATCCTAGCCAAAACCAAGATGAACCAAGGATATTGACAGTGGAAACAGATGAGGATACAGAGAAGCAACTTGATGAGAAGCTTATAAATTGGTTTATGGAGAGTCATGCAAATGATGATTCAATTATTTACATTGAGAAAATGGTTAACAATGGGGAGGAGACAGTGGCAGCAATAAGGTCATTGGGTGATGTTCATGGACTTTTCATAGTTGGGAGAGGCCAAGGAATGATATCACCACTCACAGCAGGACTCACTGATTGGAGTGAGTGTCCAGAGTTAGGAGCAATTGGTGATTTGTTAGCATCATCAGATTTTGTAGCAACTGCTTCAGTTATGGTAGTGCAACAATATATTGGGGCAGGGTCAGAAGGAGATTGGTTAGGGACACCAGATGGTACAACACTCACAAATGAAGAATTTGTCAATCAGATAAGCTATCATTCAACACCACCAAAGGGGCATACTGTGTTCAATACAGAACACTTGTGA 2511 0.4002 MADSKNEVQDIVCYSPFMITTNGIWQGDNPLNYSLPLLILQVMLVVIATRIFVFILKPIRQPRVIAEILGGILLGPSVLGRNKTFADAVFPLRSVMVIETMANVGLLYFLFLVGVEMDVSSLRRVGRKAVAIAIAGMIMPFAIGAIFSILWLNNTDHGIRKGAFILLLGVILSVTAFPVLARILAELKLVNTEIGRVALSSALINDMCSWILLAIAIAVSEHEKPTFASLMVLLSSVAFVAFHIFIVKPAIFWIIRKTPEGETFSDFYICLILAGVMISGFMTDFIGTHSVFGAFVFGMTIPHGPLALALVEKLEDFVSGLLLPLFFAISGLKTNIALVTGFFTWGTLILLVVLACIGKIAGTIIAAVYYQMSLTEGAALGLLMNTKGLVEVILLNIGRDSKLLDEGSFAIMVIMTVLMTAIIVPGISAIYKPSSKGFISYKRRTIQMSKKDAEFRVLVCIHTPRNVPTMINLLEASNPTKKSPICIYVLHLVELSGRTSALLIVHNSTRPDHPALNRTRAQSDHIINAFENYEQHADHVSVQPLTAISPYSTMHEDICNLAEDKRVAFIIIPFHKQQTVDGGMEVTNMAFRTVNQNVLANAPCSVGILVDRGLNGSNRMAADQVCHNVAVLFFGGPDDREALSYGWRMSEHQGISLTVMRFVPGEDIVGPRMNPSQNQDEPRILTVETDEDTEKQLDEKLINWFMESHANDDSIIYIEKMVNNGEETVAAIRSLGDVHGLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFVATASVMVVQQYIGAGSEGDWLGTPDGTTLTNEEFVNQISYHSTPPKGHTVFNTEHL. 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06293 836 Gene3D - 37 436 IPR038770 -
Seca12g06293 836 PANTHER CATION/H + ANTIPORTER 12 792 - -
Seca12g06293 836 FunFam Cation/H(+) antiporter 15 37 437 - -
Seca12g06293 836 Gene3D - 479 757 - -
Seca12g06293 836 Pfam Sodium/hydrogen exchanger family 45 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06293 Seca-Chr12 154826842 154829612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06293 1 826 Antiporter Super Family AT2G13620 65.459 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06293 K26731 - pvy:116140351 1196.03