Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06259 ATGAAATCATTTATTGAGAAATGTCTCGTCCCAGCATGTCAAAGATTGTCAGCAAAGGAACTTTTGATGGACCCCTTTCTCCAAGTGAATGGTTCAACAAAGAATTGTCCTTTTCCATTGCCAGATATTGTTCTTCCCAAAGTGGGAGCCTTTGAAAGCCGATGTATGATGTCAGAAGGTCCCGCTAGTGTGAGAAATGGAGCCATTTCTACGGATGTTGGTGACACCAGTGAACTACCTGTGATCACTGTATTTGATAATTCTACTGGTGATGCATCACGTTCTCGATGTGTTGAGATAAGAAGGTTGAAGGGAGGTGATATCTTCTTTTTAAAAGGTGAAGAAAATGATGAGAATTCTGTATCATTAGTTCTGCGGATAGCTGATCAGAGTGGACGAGCAAGAAATATCCATTTCATATTCTACCTTGATAGTGATACTGCTGTCTCAGTTTCAAGTGAAATGGTCGAGCAACTTGAACTTGCCGATCAGAATGTTAAATTCATAGCTGAGTTAATTGATTTGTTATTGATGAATTTGGTTCCTGATTGGAAACCTTGTGTAGTAATTGATCATTTGGTTTCTCCAAATGGTAAATGGACTAATGCTAGCCAAGAGGGAGTCTTGGAGTTGGCAAAAGATGAAGGAAGCTCAAAACATTCTACCAAAATTGTGTCTGTAGATGCAGGTCCCTCAACCTCCTCTGCAAGATCAGCAGCAAAAGAAAAACTTGATAATATGGATTTATGTTCTGAGATGTCATATGCTTCTGCAACATCAGAGTTCAATGATAATAAGTTGTCCATAGCCTCATTCATGTCTGCTGAATCAGGATTTGATAAAGGGGGGCAATCCTCATCTCCATCTGAAAATGGGGCATCGCCTAAATATTGCAAGCTTTCGGACACGGGAAGCAACGGTATGATGAGCTTCTCTAGCTATCCCATCAGTGTTTCCTCCTTGTCTGAACCTGAAGATGAGTTGAAAATAGAATTAGAAATGATCGAGCAGAAGTATCAAGAGGCACTTAAAGATTTATCCAAAAGAAGATACCAGGCCATCATGGATATTAAAAGGAGAATTTCAGAGAAGACGGTATCATAG 1104 0.3976 MKSFIEKCLVPACQRLSAKELLMDPFLQVNGSTKNCPFPLPDIVLPKVGAFESRCMMSEGPASVRNGAISTDVGDTSELPVITVFDNSTGDASRSRCVEIRRLKGGDIFFLKGEENDENSVSLVLRIADQSGRARNIHFIFYLDSDTAVSVSSEMVEQLELADQNVKFIAELIDLLLMNLVPDWKPCVVIDHLVSPNGKWTNASQEGVLELAKDEGSSKHSTKIVSVDAGPSTSSARSAAKEKLDNMDLCSEMSYASATSEFNDNKLSIASFMSAESGFDKGGQSSSPSENGASPKYCKLSDTGSNGMMSFSSYPISVSSLSEPEDELKIELEMIEQKYQEALKDLSKRRYQAIMDIKRRISEKTVS. 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06259 367 Coils Coil 325 345 - -
Seca12g06259 367 MobiDBLite consensus disorder prediction 279 299 - -
Seca12g06259 367 FunFam Serine/threonine-protein kinase WNK8 119 214 - -
Seca12g06259 367 Gene3D - 119 185 - -
Seca12g06259 367 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06259 Seca-Chr12 154425237 154428742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06259 1 222 MAP Kinase Kinase Kinase AT3G18750 57.848 7.01e-85 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06259 K08867 - gmx:121175054 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06259 12 154425237 154428742 Seca12g06259 12 154425237 154428742 ECH
Seca12g06259 12 154425237 154428742 Seca4g01995 4 33991274 33994716 PCT