Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06187 ATGTTGGGATTTGTTGGTACTGAAGAATCTGAATACAGGATTGAACGGCCTAGTATCAAAGTCATATTGCTGGATATGTTGTCGGGTTCAATGGATACTTCTGCTACAGCAATTGAGTGGACAGTTTCAGAGCTACTCAAGCATCCAAAGGTGATGAAGAAAGTCCAAATGGAGTTGGAAAATGTGGTGGGTGTGGAAAGGAAGGTGGAGGAGTCTGACTTGGACAAGTTGGAGTATTTGGATATGGTTATCAAGGAAAGCTTAAGGATCCATCCAGTGGCACCATTATTAATACCACACCAATCTATGGAAGATTGCATGGTTGGGGAATTTTTCATACCAAAAAACTCAAGGGTGATAGTAAATGCATGGGCAATAATGAGAGACCCAAGTTCTTGGACTGAGGCAGAGAAGTTTTGGCCTGAGAGATTTGAAGGAAGCAACGTAGATGTGAAAGGGCGTGACTTTGAACTGATACCATTTGGTTCTGGCAGAAGGGGTTGTCCTGGATTGCAATTGGGCCTAACTGTGGTTCGATTAGTGGTAGCCCAGCTTGTGCATTGCTTTGATTGGAAGCTACCAAATGATATGAACCCAACTGATTTGGACATGACTGAGGAGTTTGGCCTTACAATGCCTAGGGCCAAGCATCTTGTTGCATTTCCTTACTTATCGTCTTCATATATAATGAAATGGATTAGGGGGAAATGTAATGGTAACATTGTATTTTATGTTTGA 738 0.4201 MLGFVGTEESEYRIERPSIKVILLDMLSGSMDTSATAIEWTVSELLKHPKVMKKVQMELENVVGVERKVEESDLDKLEYLDMVIKESLRIHPVAPLLIPHQSMEDCMVGEFFIPKNSRVIVNAWAIMRDPSSWTEAEKFWPERFEGSNVDVKGRDFELIPFGSGRRGCPGLQLGLTVVRLVVAQLVHCFDWKLPNDMNPTDLDMTEEFGLTMPRAKHLVAFPYLSSSYIMKWIRGKCNGNIVFYV. 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06187 245 PANTHER CYTOCHROME P450 93A3-LIKE 1 223 - -
Seca12g06187 245 PRINTS P450 superfamily signature 159 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06187 245 PRINTS P450 superfamily signature 82 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06187 245 PRINTS P450 superfamily signature 29 46 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06187 245 PRINTS P450 superfamily signature 168 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06187 245 SUPERFAMILY Cytochrome P450 11 218 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06187 245 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 161 170 IPR017972 GO:0005506|GO:0016705
Seca12g06187 245 PRINTS E-class P450 group I signature 81 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06187 245 PRINTS E-class P450 group I signature 38 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06187 245 PRINTS E-class P450 group I signature 158 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06187 245 PRINTS E-class P450 group I signature 168 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06187 245 PRINTS E-class P450 group I signature 122 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06187 245 PRINTS E-class P450 group I signature 18 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06187 245 FunFam Predicted protein 27 220 - -
Seca12g06187 245 Pfam Cytochrome P450 14 217 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06187 245 Gene3D Cytochrome P450 4 223 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06187 Seca-Chr12 153760527 153761437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06187 9 222 Monolignol Biosynthesis Gene Families AT4G36220 52.558 1.49e-78 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06187 K20562 - gmx:100809526 394.815