Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06186 ATGATTTGGATAGCAATTTTTGTAGTTTCTCTTACTTCTCTGTGGCTATGGAGAACCAGCAAGAATGCAAAGAGACTGCCTCCAGGTCCAAAAGGATTGCCAATTTTGGGAAGCCTTTACAAATTGGGTGCAAATCCTCACCGTGATCTGCATAAACTATCTCAAAAATTTGGACCTATTATGTACTTGCGCTTAGGCTTTGTGCCAACCATAGTTGTTTCTTCACCACAAGCTGCTGAACTGTTCCTCAAGACCCATGACCTTGTCTTTGCAAGTAGACCACCTCATGAGGCTGCAAAGTACATATCTTGGGAGCAGAGGAACTTGAGCTTTGGAAAATATGGTTCTTATTGGCGCAACATGCGAAAGATGTGCACTTTGGAATTGCTAAGCCAAACCAAAATTAACTCCTTCAAACCCATCAGGGAAGAAGAGCTTGACTTGTTTGTCAAGCTTCTAAGAGAGGCAGCCAATGATGGAGTTTGTGTTGATCTCAGCGCCAAAATTTCAACACTCACAGCAGACATGAGTTGTAGAATGGTTTTGGGGAAGAAGTATATGGACCAAGACTTGGATGAGAAGGGGTTCAAAAGTGTGATGCAAGAGGGAATGCATTTAGCAGCAACACCTAACATTGGTGATTACATTCCTTACATTGGTGCACTTGACCTTCAAGGGCTAACTAAGCGCATGAAGGTAGTGCACAAAATCTTTGATGACTTCTTTGAGAAAATTATTGATGAGCATATGCAATCAGAGAACAAAGAAGATAAGATCAAGGATTTTGTGGATGTCATGTTGGGATTTGTTGGTACTGAAGAATCTGAGTACAGGATTGAACGGCCTAATATCAAAGCCATATTGCTGGATATGCTGGCGGGTTCAATGGATACTTCTGCTACAGCAATTGAGTGGACAATTTCAGAGCTACTCAAGCATCCACAAGTGATGAAGAAAGTCCAAATGGAGTTGGAAACTGTGGTGGGTATGAAGAGGAAAGTGGAGGAGTCTGACTTGGACAACTTGGAGTATTTAGATATGGTTATAAAGGAAAGCTTAAGGATTCATCCAGTGGCACCATTACTAATACCACACCAATCTGTGGAAGATTGCATGGTTGGAGAATTTTTCATACCAAAAAACTCAAGGGTGATTGTAAATGCATGGGCTATAATGAGAGACCCAAGTGCTTGGACTGAGCCAGAGAAGTTCTGGCCTGAGAGATTTGAGGGAAGCAACATAGATGTGAGAGGGCGTGACTTTGAGCTGATACCATTTGGTTCTGGCAGAAGGGGCTGTCCTGGATTGCAATTGGGTCTAACTGTGGTTCGTTTAGTGGTAGCCCAGCTTGTCCATTGCTTTGATTGGAAGCTACCCAATGACATGAAACCAACAGATTTGGACATGACTGAGGAGTTTGGCCTTACAATGCCTATGGCCAAGCATTTATGGCTATGGAGAAGCAGCAACAACGCAAAGAAATTACCTCCAGGTCCAAGAGGATTGCCAATTTTGGGGAGCCTTCATAAGTTGGGTACAAATCCTCATCGTGATCTGCACCAACTATCTCAAAAACATGGACCTATCATGTTCTTGCGCTTAGGATTTGTGCCAACCATAGTTGTTTCTTCACCACAAGCTGCTCAACTGTTCCTCAAGACCCATGACCTTATCTTTGCAAGTAGACCACCTCATGAGTCTGCAAAATACATCGCTTGGGAGCAGAGGAACTTGAGCTTTGCTGCATATGGTTCTTATTGGCGCAACATGCGTAAGATGTGCACCTTGGAATTGCTAAGCCAAACCAAAGTTAACTCCTTCAAACCCATCAGGGAAGAGGAGGTTCACCTATTGATCAAGCTTCTAAGAGAGGCAGCCAATGATGGAGCTGATGTTGATGTTAGTGCCAAAATTTCAACACTCACTGCAGACATGAGTTGTAGAATGGTTTTGGGGAAGAAGTATATGGACCAAGACTTGGATGAGAAGGGGTTCAAAAGTGTGATGCAAGAGGGAATGCATTTAGCAGCAACACCTAACATTGGTGATTACATTCCTTACATTGGTGCACTTGACCTTCAAGGGCTAACTAAGCGCATGAAGATAGTGCACAAAATCTTTGATGACTTCTTTGAGAAAATTATTGATGAACATATACATATGCAATCAGACAATAAAGAAGATAAGATCAAGGATTTTGTGGATATCATGTTAGGCTTTGTTGGTACTGAAGAATCTGAATACAGGATTGAAAGGCCCAATATCAAAGCCATATTGCTGGATATGCTGGCGGGTTCAATGGATACTTCTGCTACAGCAATTGAGTGGGCAATTTCAGAGCTCCTCAAGCATCCAAAGGTGATGAAGAAAGTCCAAATGGAGTTGGAAACTGTGGTGGGTATGAAGAGGAAGGTGGAGGAGTCTGACTTGGACAAGTTGGAGTATTTGGATATGGTTATCAAGGAAAGCTTTAGGATCCATCCAGTGGGACCATTACTAATACCACACCAATCTGTGGAAGATTGCATGGTTGGAGAATATTTCATACCAAAAAACTCAAGGGTGATAGTAAATGCATGGGCAATAATGAGAGACCCAAGTTCTTGGACTGAGGCAGAGAAGTTCTGGCCTGAGAGATTTGAGGGAAGCAACATAGATGTGAGAGGGCGTGACTTTGAGCTGATACCATTTGGTTCTGGCAGAAGGGGTTGTCCTGGATTGCAATTGGGTCTAACTGTGGTTCGTTTAGTGGTAGCCCAGCTTGTCCATTGCTTTGATTGGAAGCTACCAAATGACATGAAACCAACAGATTTGGACATGACTGAGGAGTTTGGCCTTACAATGCCTAGGGCCAAGCATTTAGTTGCAATTCCTACTTATCGTCTTCCCAATGAAATAGATTAG 2904 0.428 MIWIAIFVVSLTSLWLWRTSKNAKRLPPGPKGLPILGSLYKLGANPHRDLHKLSQKFGPIMYLRLGFVPTIVVSSPQAAELFLKTHDLVFASRPPHEAAKYISWEQRNLSFGKYGSYWRNMRKMCTLELLSQTKINSFKPIREEELDLFVKLLREAANDGVCVDLSAKISTLTADMSCRMVLGKKYMDQDLDEKGFKSVMQEGMHLAATPNIGDYIPYIGALDLQGLTKRMKVVHKIFDDFFEKIIDEHMQSENKEDKIKDFVDVMLGFVGTEESEYRIERPNIKAILLDMLAGSMDTSATAIEWTISELLKHPQVMKKVQMELETVVGMKRKVEESDLDNLEYLDMVIKESLRIHPVAPLLIPHQSVEDCMVGEFFIPKNSRVIVNAWAIMRDPSAWTEPEKFWPERFEGSNIDVRGRDFELIPFGSGRRGCPGLQLGLTVVRLVVAQLVHCFDWKLPNDMKPTDLDMTEEFGLTMPMAKHLWLWRSSNNAKKLPPGPRGLPILGSLHKLGTNPHRDLHQLSQKHGPIMFLRLGFVPTIVVSSPQAAQLFLKTHDLIFASRPPHESAKYIAWEQRNLSFAAYGSYWRNMRKMCTLELLSQTKVNSFKPIREEEVHLLIKLLREAANDGADVDVSAKISTLTADMSCRMVLGKKYMDQDLDEKGFKSVMQEGMHLAATPNIGDYIPYIGALDLQGLTKRMKIVHKIFDDFFEKIIDEHIHMQSDNKEDKIKDFVDIMLGFVGTEESEYRIERPNIKAILLDMLAGSMDTSATAIEWAISELLKHPKVMKKVQMELETVVGMKRKVEESDLDKLEYLDMVIKESFRIHPVGPLLIPHQSVEDCMVGEYFIPKNSRVIVNAWAIMRDPSSWTEAEKFWPERFEGSNIDVRGRDFELIPFGSGRRGCPGLQLGLTVVRLVVAQLVHCFDWKLPNDMKPTDLDMTEEFGLTMPRAKHLVAIPTYRLPNEID. 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06186 967 CDD CYP71-like 525 954 - -
Seca12g06186 967 FunFam Cytochrome P450 83B1 14 485 - -
Seca12g06186 967 SUPERFAMILY Cytochrome P450 27 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 CDD CYP71-like 56 483 - -
Seca12g06186 967 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 SUPERFAMILY Cytochrome P450 496 961 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Seca12g06186 967 FunFam Cytochrome P450 83B1 486 957 - -
Seca12g06186 967 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 897 906 IPR017972 GO:0005506|GO:0016705
Seca12g06186 967 Gene3D Cytochrome P450 486 959 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 Pfam Cytochrome P450 496 953 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 Pfam Cytochrome P450 27 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 Gene3D Cytochrome P450 15 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06186 967 PANTHER CYTOCHROME P450 93A3-LIKE 484 962 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06186 Seca-Chr12 153741258 153751623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06186 487 964 Cytochrome P450 AT5G07990 43.121 1.52e-129 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06186 - K20562 sspl:121786580 1241.1