Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06181 ATGTCGTACGAAGCTGATGCAGTTAGAGCTAGAGGTGGATCTTACAAGACAACAGGTGTGGTGATGCTGTGGATCACTTTATATTGTTCAATATCTACATGTTTTTTTACCCTGGCTTGGCAATCTCTTGAGGCAACAAAACTGCAGGGATTGTATACTGGTGGTGGATTGGGTTCTATTAATTTGGGTTTTGCTGGCTCTATGAATTCAGAGATAACAACTTTTAAGATGGAATATGGACACTGGGTGGAGGAGCAAAATAGACAAATCTCGGACTTGAGAAGTGCTTTAAGTGCTCATATCAGTGACACACAGCTCGAGACACTTGTACATGGCATCATGAACCACTATTTCAAACTCTTCTGCATGAAATCTACTGCTGCAAAAGCTGATGTTTTCTATGTTAATTATGGTTTGTGGAAAACGGCAGCTGAACGGATTTTCTTGTGGATTGGAGGCTTTCGCCCATCTGAACTTCTAAAGGTTCTGGTCCCTTTGATAGAACCATTAACAGAGCAACAACGGTTTGATGCGTGTAACCTTGAAAAATCATGCCAACAAGCAGAAGATGCCCTTTCTCAAGGTATGGAAAAACTCCAGCACATACTTGCTGAAGCTGTAGCAGGACAAGTCGTTGAAGGAACCTACATTCCACAGATGACTATTGCAATGGAAAGGCTAGAAGCTCTTGTGAGCTTTGTGAACCAGGCTGATCATCTACGACAGGAAGCCTTGCAACAAATGTCTCGAATACTCACCGTACGTCAAACTGCTCGATGGTTACTTGCTTTGGGGGAATATTTTCAACGCATGAGGGCTTTGAGCAAACTTTGGGCCAATCGTCCTCGTGAACCTGCTTAG 861 0.4309 MSYEADAVRARGGSYKTTGVVMLWITLYCSISTCFFTLAWQSLEATKLQGLYTGGGLGSINLGFAGSMNSEITTFKMEYGHWVEEQNRQISDLRSALSAHISDTQLETLVHGIMNHYFKLFCMKSTAAKADVFYVNYGLWKTAAERIFLWIGGFRPSELLKVLVPLIEPLTEQQRFDACNLEKSCQQAEDALSQGMEKLQHILAEAVAGQVVEGTYIPQMTIAMERLEALVSFVNQADHLRQEALQQMSRILTVRQTARWLLALGEYFQRMRALSKLWANRPREPA. 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06181 286 ProSiteProfiles DOG1 domain profile. 72 281 IPR025422 GO:0006351|GO:0043565
Seca12g06181 286 PANTHER TRANSCRIPTION FACTOR TGA9 41 284 - -
Seca12g06181 286 Pfam Seed dormancy control 89 164 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06181 Seca-Chr12 153711678 153717230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06181 41 285 Calmodulin-binding Proteins AT5G10030 68.699 1.36e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06181 K14431 - gmx:100808443 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06181 12 153711678 153717230 Seca12g06181 12 153711678 153717230 ECH
Seca12g06181 12 153711678 153717230 Seca6g01976 6 78641678 78647984 PCT