LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca12g06112	ATGTTACTCACTTATCATCATCACCCTTTTGCTTATTCACCTTCTTCTACCCATTCACTCTGCACCATAAACAGAAACTGCAATCTCTCCCTCATCGCCTTTCGCCCCCTGCATCTCAACATCCCAATCCTCAACTTCAAATCATCCACACCCCACAGGTTCAGTTCCCTCACCACCCACGTCGACCCCTTTCGCGATGGTTCCGTGCCCAAACATGTCGCCGGCGATTCCAATTTCGATTCCCTCCTTTCGTTACTCGAACTCACGTGCCTGCTCTCGTCGGCCATCGTGTCGGCCGGCGTTGCCGTTATTGCGGGTTTCAAGAAGGAGCTCTTTGCGGCAATTGGTAACAGGGCTGCTCTGTGGAGCATTTTGATGTTGGTGGTTGGGGTTTTAGCTGGGGCGTTGATTCGGAGGCGCAAATGGAGGGAAACGGTGAATGGTGGGTTCAGTGGATCGCAGGTGAATTTGCTGGAGAGGATTGAGAAATTGGAAGAGGATTTGAGGAGCTCTGCGACGGTGGTTAGGGTTTTGTCGAGGCAGCTAGAGAAATTGGGGATTAGGTTTCGGGTCACTCGGAAGGCTTTGAAGGAGCCCATAACTGAGACTGCAGCTCTGGCGCAGAAGAATTCTGAGGCCGCAAGAGCATTATCAGTGCAATCAGACATTTTGGAGAAGGAGCTTGGTGAAATTCAACAGGTTTTACTAGCAATGCAGGAACAACAGCAAAAACAACTTGATCTGATTCTTGCAATTGGGAAGGCTGGTAAGCTATGGGAAAGCAAGCGAGAAACTAGTGAAGAACATACTACATTAGAAATGTCTAACTCAACTGCAGATGAGGTAAAACAGGAGGTCCACCCAATTTGA	870	0.4908	MLLTYHHHPFAYSPSSTHSLCTINRNCNLSLIAFRPLHLNIPILNFKSSTPHRFSSLTTHVDPFRDGSVPKHVAGDSNFDSLLSLLELTCLLSSAIVSAGVAVIAGFKKELFAAIGNRAALWSILMLVVGVLAGALIRRRKWRETVNGGFSGSQVNLLERIEKLEEDLRSSATVVRVLSRQLEKLGIRFRVTRKALKEPITETAALAQKNSEAARALSVQSDILEKELGEIQQVLLAMQEQQQKQLDLILAIGKAGKLWESKRETSEEHTTLEMSNSTADEVKQEVHPI.	290

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca12g06112	289	PANTHER	TRANSMEMBRANE PROTEIN	34	284	-	-
	Seca12g06112	289	Coils	Coil	224	244	-	-
	Seca12g06112	289	MobiDBLite	consensus disorder prediction	262	289	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca12g06112	Seca-Chr12	153033606	153037465	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca12g06112	59	260	Eukaryotic Initiation Factors Gene Family	AT5G65250	53.398	4.43e-59	189

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca12g06112	-		-	gmx:100790782	344.739