Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06105 ATGGAAGAACGGTATGAGATAATCAAAGATATTGGATCAGGAAACTTTGGTGTGGCAAAGCTGGTAAGGGAGAAATGGAGTGGTCAGTTATATGCTGTCAAGTTTATTGAGAGAGGCTTCAAGGTGTTACTTACTCCAACTCATCTAGCAATAGTCATGGAATATGCAGCAGGAGGAGAATTATTTGAAAGAATATGCAGTGCTGGTAGATTCAGTGAGGACGAGGCAAGATATTTCTTTCAGCAGCTGATTTCTGGAGTCAGCTATTGCCATTCAATGGAAATTTGCCATAGAGATCTTAAGCTGGAAAACACACTTTTAGATGGAAGCTCAGCACCACGGCTCAAAATCTGTGACTTTGGTTACTCAAAGGCAAGAAATTTTCAGTTCATTTCATTTAACATTTGTTTCAGAGTCTAG 420 0.3952 MEERYEIIKDIGSGNFGVAKLVREKWSGQLYAVKFIERGFKVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSAPRLKICDFGYSKARNFQFISFNICFRV. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06105 139 Gene3D Transferase(Phosphotransferase) domain 1 56 125 - -
Seca12g06105 139 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g06105 139 Gene3D Phosphorylase Kinase; domain 1 43 55 - -
Seca12g06105 139 PANTHER SERINE/THREONINE KINASE 3 124 - -
Seca12g06105 139 SMART serkin_6 5 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g06105 139 SUPERFAMILY Protein kinase-like (PK-like) 3 128 IPR011009 -
Seca12g06105 139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 95 107 IPR008271 GO:0004672|GO:0006468
Seca12g06105 139 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Seca12g06105 139 Gene3D Phosphorylase Kinase; domain 1 1 40 - -
Seca12g06105 139 Pfam Protein kinase domain 40 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06105 Seca-Chr12 152990106 152992058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06105 4 123 CBL-interacting serine-threonine protein kinases AT4G24400 38.926 4.90e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Seca12g06105 Pkinase 1.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06105 K14498 - gmx:100807981 232.646