Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06020 ATGGGTAAGGGCCCCTTCTCCTTTCGCCGCTCCGCCTCCCGCCGCCGCCACAAGAAGGCCGCCGTTCCGCCACAGTCGCCGCCGATTGCGGCCGAAATTGCAGGTTCTCCGGCGGAGAACGCCGACAACCGGTTGATCACCGGTGGCGCGGTGATGAAGGCGAAGAAGAAAACCGGCGGAGCCAGGTTGTGGATGCGGTTTGACCGTTCAGGCCGGTCAGAGCTCGTGGAGTGGGAGAAAAACACGATCATCCGTCACGCATCGATTCCCGCTAGGGACTTGAGGATTTTGGGCCCTGTCTTCTCCCATTCCTCCAATATCCTCGCAAGAGAGAAAGCAATGGTGGTTAATTTGGAGTTTATAAAGGCTATAGTGACAGCTGAAGAAGTATTATTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCATTTGTTGAACAACTCAGGCAACAACTTCCACATAAGAATCAACAACCACCTAAACAACTACTTGGTGGTGGACCTGGGGATGAACAAGAAAGTGAAATGCAGGTTTCTTCTGCTACTGGTGGCAGACAGTGGTTACCTGTGCCAGAGGCTGTTGAAGGTCTGCAGTCTGAGCTTCCATTTGAGTTTCAAGTTCTGGAGATTGCTCTGGAGGTTGTTTGTACTTATCTGGACTCGAATGTGGCAGACCTTGAGAGAGGTGCTTATCCTGTGTTAGATGAATTGGCTAGGAATGTTAGCACCAAGAATCTTGAACATGTAAGAAGTTTGAAGAGCAACCTTACACGTTTGCTCGCACGTGTGCAAAAGGTGCGAGATGAAATTGAGCATCTATTAGATGACAATGAAGACATGGCACAACTATATTTGACAAGGAAGTGGTTGCAAAATCAGCAATTTGAGGCTCATTTGGGTACCACGACCTCAAATAACCTGTCAAATACTACACATGTTGTTCGTCGACTTAGCTCTACCAGAAGTGGAAGTCTTGTGACTAGCAACTACGGTGATGATAATGATGTGGAGGACTTGGAGATGTTGCTTGAGGCATATTTTATGCAGTTGGATGGAACTCGTAATAAGATATTGTCTGTTAGGGAGTATATTGATGACACTGAAGACTATGTCAACATTCAACTTGATAACCACAGAAATGAACTTATTCAGCTGCAGTTGACACTGACTATTGCATCATTTGCTATTGCTGTTGAAACTTTGATAGCTAGTGCATTTGGTATGAACATTCCTTGTACACTATATGATAAAGATGGAATATTTTGGACCGTTGTTTGGGTCATGTCTGCAGCATGCGTGTTGCTCTTCCTGCTTGTTTTAGCGTATGCAAAATGGAAAAAGTTGCTGGGATCATAA 1353 0.4619 MGKGPFSFRRSASRRRHKKAAVPPQSPPIAAEIAGSPAENADNRLITGGAVMKAKKKTGGARLWMRFDRSGRSELVEWEKNTIIRHASIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPHKNQQPPKQLLGGGPGDEQESEMQVSSATGGRQWLPVPEAVEGLQSELPFEFQVLEIALEVVCTYLDSNVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQFEAHLGTTTSNNLSNTTHVVRRLSSTRSGSLVTSNYGDDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAVETLIASAFGMNIPCTLYDKDGIFWTVVWVMSAACVLLFLLVLAYAKWKKLLGS. 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06020 450 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 38 448 IPR039204 -
Seca12g06020 450 Gene3D - 50 135 - -
Seca12g06020 450 CDD Mrs2_Mfm1p-like 64 447 IPR039204 -
Seca12g06020 450 FunFam Magnesium transporter MRS2-1 52 135 - -
Seca12g06020 450 Gene3D Magnesium transport protein CorA, transmembrane region 388 446 - -
Seca12g06020 450 MobiDBLite consensus disorder prediction 1 32 - -
Seca12g06020 450 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 386 438 IPR045863 -
Seca12g06020 450 Coils Coil 248 282 - -
Seca12g06020 450 Gene3D Magnesium transport protein CorA, transmembrane region 142 381 - -
Seca12g06020 450 MobiDBLite consensus disorder prediction 154 182 - -
Seca12g06020 450 Pfam CorA-like Mg2+ transporter protein 333 441 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06020 Seca-Chr12 152068624 152072072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06020 1 450 MRS2 Gene Family AT3G58970 67.033 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06020 K16075 - gmx:100812561 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06020 12 152068624 152072072 Seca6g01791 6 73973929 73976641 PCT