Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06019 ATGGCAAATTCAAAGGGCTCATCGGGTATCAGAAACTTCATGTATCCTGGAAAGCATCCTCTGCTTCCTCCTAAAAGTCCATTCCCTAGTGTTTCTCAAGCATATGCTGATTATGTCCCAAATCCTGCAGTTGGTCCAAAGGCTGCTAACAAGCTTAGAGAGGGAAACACACACCACCAACGTACTTCATCTGAGAGCCTTGTTATTGAGGAGCAGCCTTCATGGCTTGATGATCTCCTTAATGAGCCAGAGACACCTGTTCGAAAGGGTGGTCATAGGCGTTCATCAAGTGATTCTTTTGCATACATAGACACAGTCAATGTTTCTAACATCAGTTATGCAGATCAGGATGAGTATAGATATAAGAATTTGATGTCTATTCCATCTTGGTCATCTCAGGACTTTGACCGCAGTAAGGATGCTCGTCATGTACCCATGTATGCAGAAATGAACGCAGCAAGACAGAAAAATAGGTCATGGGACTCTTTTTCGAATGCTGTGACAAATCTGGCTGGTGTTCCATCTGGCAAAGACAATGTTGCTTTTCGTAGTTCAGGATCACCGACACCATGTACACCACATGAAGCTGATGGGCTCCCACCAACTGCAAATGAAAAACAGGATTCAGTAGAATATGGCTTACAGGATGCAAAATCATCTTCTGATAAAAAGGATGGTTCACATGCAAAGTCATCTGCTTCTGAAACTGATACAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTCCGTAAACTTCAGTACATTGCTGAGTTGGAAAGAAATGTACAAGCTTTACAGGTAGAAGGGTCTGAAGTCTCAGCTGAGCTTGAATTTCTTAACCAGCAGAATCTCATCCTAAGTATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAGTTTAGCACAGGAGCAGCTTATCAAATATTTGGAGCACGAAGTACTGGAAAGAGAGATTGGAAGATTGCGTGCATTATATCAGCAGCAGCTGCAGCAGACACAACAACAGCAACAACCATCTTCTAGTCATAGACGCACAAACAGCAGAGACCTTGAATCTCAGTTTGCAAACCTTTCTATAAAGCACAAGGACACCAATTCAGGGCATGACCCTGCAACTGGAGCACTCAGAATTTAG 1140 0.4289 MANSKGSSGIRNFMYPGKHPLLPPKSPFPSVSQAYADYVPNPAVGPKAANKLREGNTHHQRTSSESLVIEEQPSWLDDLLNEPETPVRKGGHRRSSSDSFAYIDTVNVSNISYADQDEYRYKNLMSIPSWSSQDFDRSKDARHVPMYAEMNAARQKNRSWDSFSNAVTNLAGVPSGKDNVAFRSSGSPTPCTPHEADGLPPTANEKQDSVEYGLQDAKSSSDKKDGSHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQVEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEHEVLEREIGRLRALYQQQLQQTQQQQQPSSSHRRTNSRDLESQFANLSIKHKDTNSGHDPATGALRI. 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06019 379 MobiDBLite consensus disorder prediction 331 345 - -
Seca12g06019 379 MobiDBLite consensus disorder prediction 331 350 - -
Seca12g06019 379 CDD bZIP_plant_RF2 237 285 IPR044759 GO:0003700|GO:0006355
Seca12g06019 379 SMART brlzneu 235 294 IPR004827 GO:0003700|GO:0006355
Seca12g06019 379 SUPERFAMILY Leucine zipper domain 246 288 IPR046347 GO:0003700|GO:0006355
Seca12g06019 379 Gene3D - 239 291 - -
Seca12g06019 379 MobiDBLite consensus disorder prediction 174 245 - -
Seca12g06019 379 Coils Coil 257 305 - -
Seca12g06019 379 MobiDBLite consensus disorder prediction 217 244 - -
Seca12g06019 379 MobiDBLite consensus disorder prediction 42 70 - -
Seca12g06019 379 Coils Coil 313 333 - -
Seca12g06019 379 MobiDBLite consensus disorder prediction 358 379 - -
Seca12g06019 379 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 361 IPR044797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06019 Seca-Chr12 152057629 152063404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06019 22 309 bZIP Transcription Factor Family AT2G42380 29.085 1.57e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06019 - - gmx:100813098 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06019 12 152057629 152063404 Seca12g06019 12 152057629 152063404 ECH