Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06006 ATGGTTAAGCTAAGCAAAATGTTGATTTATTATATTTGTTTTGATTATAACAAGATTGGTTATTCATTAGAAATGAAAAATAAAAAGAATGTCATGATGAAGAGTGTAATACTTTTGTTACTTTACAATTTTGAAGGAAAGGAGCAGGTGCATGTCTATCCCATAATACAGCTATACACATTTGAATTGGCTTGTTGCTTATTTTTAAGCATTGAAGACTCTATCCATGTATCAAGGATTTCAACAAAATTTGAAGATTTTTTAAAAGGGATGATTGGATTCCCCATCAACTTGCCTGGAACAAGGTTTCATCGGGCAATGAAAGCTGCAAATGAAATAAGGGAAGAAATTAAAGTGATTCTAAAGAAAAGGAAAATGGATTTGGAAGAAAAGAGGGTGTCACCAACCCAGGACCTTCTATCACATTTGCTTGTTACATCTGACACCAGTGGGAGGTTTCTGACTGAAATGGAGATTATTGATAACATACTACTACTTCTTTTTGCTGGCCATGATACTTCTAGATCAGTGTTATCATCAGTCATGTGGTATCTTGGACAGTTACCTGAAGTTTATGAACATGTGTTGAAAGAACAACTTGAAATCAGCCAAGGGAAAGAGGCAGGGGAGTTGTTGCAATGGCAGGATGTTCAGAAAATGAAATACTCTTGGAATGTTGTATCTGAAGTTTTGAGGCTGTCACCACCTGTCAGTGGTGCTTACAGAGAAGCAATAAAGGATTTCACCTATGCTGATTATAACATTCCTAAAGGGTGGAAGTTACATTGGAACACTGGTTCATCACACTTGGATCCAATACTTTTCCCAAATCCTGAAAATTTTGATGCTTCAAGGTTTGAAGGAGAAGGGCCTACACCCTTTTCATATGTTCCATTTGGAGGAGGACCTCGAATGTGTTTGGGACAAGAGTTTGCTCGGCTAGAGATACTTGTGTTTATGCATAATATTGTGAAACGATTCAAGTGGGATTTAGTGATTCCTGATGAGAAGTTCAAGTATGATCCCATGCTAGAACCAGAAAAAGGACTTCCAATTCGACTTCAACCTTCCCATGTCTAG 1080 0.3722 MVKLSKMLIYYICFDYNKIGYSLEMKNKKNVMMKSVILLLLYNFEGKEQVHVYPIIQLYTFELACCLFLSIEDSIHVSRISTKFEDFLKGMIGFPINLPGTRFHRAMKAANEIREEIKVILKKRKMDLEEKRVSPTQDLLSHLLVTSDTSGRFLTEMEIIDNILLLLFAGHDTSRSVLSSVMWYLGQLPEVYEHVLKEQLEISQGKEAGELLQWQDVQKMKYSWNVVSEVLRLSPPVSGAYREAIKDFTYADYNIPKGWKLHWNTGSSHLDPILFPNPENFDASRFEGEGPTPFSYVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWDLVIPDEKFKYDPMLEPEKGLPIRLQPSHV. 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06006 359 PANTHER CYTOCHROME P450 26 41 342 - -
Seca12g06006 359 Gene3D Cytochrome P450 23 357 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06006 359 PRINTS E-class P450 group I signature 306 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06006 359 PRINTS E-class P450 group I signature 158 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06006 359 PRINTS E-class P450 group I signature 264 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06006 359 PRINTS E-class P450 group I signature 296 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06006 359 PRINTS P450 superfamily signature 297 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06006 359 PRINTS P450 superfamily signature 306 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06006 359 PRINTS P450 superfamily signature 225 236 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06006 359 PRINTS P450 superfamily signature 169 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06006 359 Pfam Cytochrome P450 50 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06006 359 SUPERFAMILY Cytochrome P450 32 356 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06006 359 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 299 308 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06006 Seca-Chr12 151889606 151893328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06006 49 328 Cytochrome P450 AT5G45340 37.143 1.85e-54 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06006 - - gmx:100778139 570.466