Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05999 ATGACTACCCACCCATATCGTCGCCGTCATGCCGACATCCATTCTGACATGAACCATAATATGACGTCTTTAGATGTTGATTGCAAGCCTATGGTTGGTATGGAATTTGATAACATAGAGGCAACTTGGCATTTTTGGCTCACATATGGTGCACATACAGGCTTTGGAGTTAGAATGCGATACACAAATAAGAGAAAGGAAGATGGCGCTATTAGTTCATGTAGGTTTGTTTGTTGCAAGGAGGGAGTGCGAACAAACAAGAAAAGAGCTTTGGTTAACAATCATAGAGCCCAAACTAGAACTGACTGCAAAGCAAGGATTTCACTTCTATTAAAGAATGAAAAACTTGTCGTTCATGAGTTTATAGAGTACCATAACCACCCTCTACAACTTCCAGAGACAACACACATGCTTGCATCACACAGAAAGATAAGTGAAGTCTAA 444 0.4032 MTTHPYRRRHADIHSDMNHNMTSLDVDCKPMVGMEFDNIEATWHFWLTYGAHTGFGVRMRYTNKRKEDGAISSCRFVCCKEGVRTNKKRALVNNHRAQTRTDCKARISLLLKNEKLVVHEFIEYHNHPLQLPETTHMLASHRKISEV. 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05999 147 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 146 - -
Seca12g05999 147 Pfam FAR1 DNA-binding domain 45 130 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05999 Seca-Chr12 151792670 151794070 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g05999 FAR1 3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05999 - - cam:101507947 182.956