Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05990 ATGGGAGAAGCAGATATTGATCTTCAGCCCTTGATAACATCTGCAATGGCATTTGGAGATGCTGGAATGTTTGACGATATGCAAATAGGAAAATGGCTGAAATCCCATGACAATGCACTTATAGAAGATAGCATAGTCAATATTATTGATGGAAAGGTTAAACAATACATGTCACTCAAGCTCCAGAATGTCGAATCCGGAGAATTAGACTTGGAACTCGAGTGGATATCCCTTGATCATTAA 243 0.3868 MGEADIDLQPLITSAMAFGDAGMFDDMQIGKWLKSHDNALIEDSIVNIIDGKVKQYMSLKLQNVESGELDLELEWISLDH. 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05990 80 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 1 79 IPR044518 GO:0005096|GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05990 Seca-Chr12 151685676 151685918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05990 1 80 C2H2 Transcription Factor Family AT4G05330 78.750 4.25e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05990 K12486 - aew:130779991 144.821