Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05971 ATGGAAGACATGAACGACCGAAAGCCATCATGGGCAAAACTTGGTCATGTAGATTCCCTCAATTTGGAGGCTGCAAGGGTTCCCTCAACCAAAAGCCATGCATTCAAGACAAGTTGGGTGAGGACATTGAGTTTAGCATTTCAGAGCATAGGGATCATATATGGGGACATAGGAACTTCTCCTTTGTATGTGTATGATAGCACCTTCACTGATGGTATAGGCACTACTCATGACCTCCTTGGATGCTTGTCTCTCATCATCTATACCATTGCACTCGTTCCTTTTGTTAAGTATATCCTCGTCGTTTTGTGGGCGAACGACAATGGTGACGGTGGTACATTTGCATTGTATTCATTGATTTGCCGGTACGCGAAGGTGAGCTTAATTCCAAATCAGCAACCAGAAGACAGAGAGCTTTCTCATTACAAACTAAAAACACCTTCCAACCAATTAAAAAGGTCACAAAAGATTAAGCACAAGCTAGAGAATAGTAAATTCGCTAAACTTGTGCTTTTCCTTGTTACTATCATGTCAACTTCCATGGTCATCGGAGATGGAATTCTTACACCATCCATTTCAGTCCTTTCAGCAGTTGGCGGGATCAAAAACCGAAGTTCATCACTTGGCCAAGGTGCTGTTGTTGGGATCTCTATAGCAATCCTGATAATTCTGTTCTCAGTCCAGCGATTTGGCACTGATAAAGTTGGCTTCACATTTGCCCCAATGGTGTTGGTGTGGTTTACATTCATCGGAGGCATAGGTCTTTACAACTTGTTCAAATACGATATTGGTGTATTAAGAGCTTTCAATCCAAAGTACATTATTGATTACATGAAAAGAAATGGTAAAGATGGTTGGATTTCTCTTGGTGGAATTTTTCTATGCATTACAGGGACTGAAGCTATGTTTGCTGACTTGGGCCACTTCAACGTGCGAGCAGTTCAAATTAGTTTCTCTTTTGTTACATTTCCTGCACTAGTATGTGCATACAGTGGACAAGCAGCATATCTTAGAAAGTTCCCAGAACAAATTGGGAATACTTTTTATAACTCAATACCTGATCCAATATTTTGGCCAACATTTGTTGTGGCGGTTGGTGCTGCTATCATTGCAAGCCAGGCTATGATTTCAGGGGCATTTTCTATTGTCCAGCAGTCTCAAAGTTTGGGATGCTTCCCTAGTGTTAGGGTCATACATACCTCAGCTAAGTATGAAGGTCAAGTGTACATACCTGAGATCAACTTCATTCTTATGACTGCTTGTGTCATAGTCTGTGCTGCTTTCAAAACCACAGATAACATTGGTCATGCTTATGGTATGTATGCTTATATTAAGAACTTCAATCTCTCTACAAGTACTATTTTATTTTTCTTCAGAGTAATAAAAAATGGGAGCAAAGTGTCACTTAATTACTTTTCATTACAGGAATTGCTGTGTGCACAGTAA 1446 0.4018 MEDMNDRKPSWAKLGHVDSLNLEAARVPSTKSHAFKTSWVRTLSLAFQSIGIIYGDIGTSPLYVYDSTFTDGIGTTHDLLGCLSLIIYTIALVPFVKYILVVLWANDNGDGGTFALYSLICRYAKVSLIPNQQPEDRELSHYKLKTPSNQLKRSQKIKHKLENSKFAKLVLFLVTIMSTSMVIGDGILTPSISVLSAVGGIKNRSSSLGQGAVVGISIAILIILFSVQRFGTDKVGFTFAPMVLVWFTFIGGIGLYNLFKYDIGVLRAFNPKYIIDYMKRNGKDGWISLGGIFLCITGTEAMFADLGHFNVRAVQISFSFVTFPALVCAYSGQAAYLRKFPEQIGNTFYNSIPDPIFWPTFVVAVGAAIIASQAMISGAFSIVQQSQSLGCFPSVRVIHTSAKYEGQVYIPEINFILMTACVIVCAAFKTTDNIGHAYGMYAYIKNFNLSTSTILFFFRVIKNGSKVSLNYFSLQELLCAQ. 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05971 481 NCBIfam potassium uptake protein 45 455 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g05971 481 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 36 457 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g05971 481 Pfam K+ potassium transporter 46 464 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05971 Seca-Chr12 151559083 151564779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05971 4 440 Inorganic Solute Cotransporters AT4G13420 69.565 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05971 K03549 - cave:132179788 686.411