Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05934 ATGAAGTGGGGTGGAAGAAAACCTTCTTCTTCTTCTTCTCCTTCTCCTTCTCCTTCTCCTACTTATGTGTCTCCTTTTTCCTGGCTTTCCAAGTTCAAGCAGATGAGAATCAACTCAGAGCCAAAACCAGGAAAGCTGAAGCAGAATGCAAAGCAGAATTCTCCATGTGATAGTACACCACAGTATGCTTGTGGAAATAGAGGCAGATTTTATGGAGGGGATGATGATGCTTTCTGGAGATTATCCTTTAGTGAAGAGGGCAATGAGAATAAGAAGAATGAAGATATTCTGAAACCAGTAGTGTACAATTTGGATGCTAAAAGACATGGAAGAAGAGAAAGAGAAAGAGAAAGAAAGGATATTGGACTGAGAGAAGAAAGAAAATTGGTGAATGAAACAAAGAGTGCAAAGGAACTTGAATGCTTAAAGAGGAGATATGAGAGGAAAGCACAAAGAGTCTTGCAAGAGCAACTCTTGAACTTAGAAAAAGCAGAAGAGGAAGCTGAATTTGCATCAAGTAAATTCTTAGAAAAGGATGAGCTGCAATTTACATCACCTAGAACAATTTGTACACCAAGAAAGCATTTGTTTCCCTCTTCAATAGATGCAAAGATTTCTGGCCTTGGAAGCATTAGAGAAGGTAGTGTATCTGAGGAGTTGAAAGGAAAATTTAACAAACAAAGGAAATCACTTCATGTGAGCAGAGAACTCCAGAGGAGGAAACCAAAGCACAGCTCCAAGGTAAGAGTATATTCTCCAAGGATGGCTTCCAAGGTTGAAATATGCAAAATAAAGGCTATAGAAGAGAAGAAGAAAGCAAAGCTAAAGATGAAGACAGAAGAGGAAATTGTGGAGGAAAATGTAGGATTAGATCACTTTGCTGTGGTGAAATGTTCATTGGATCCACAACAAGATTTCAGAGATTCAATGATTGAGATGATCACAGAGAAACAGATCAGCAAGCCAGAAGAAATGGAAGAGCTGTTAGCATGTTATCTGACTTTGAATTCTAATGAGTACCATGATCTCATAATCAAAGTATTCCGGCAGGTATGGCTATATCTGAGCCAAGCTAGTTTGGGTATTAAATCAGACAAGCAATGTTGTTGCTATGATTAA 1119 0.3852 MKWGGRKPSSSSSPSPSPSPTYVSPFSWLSKFKQMRINSEPKPGKLKQNAKQNSPCDSTPQYACGNRGRFYGGDDDAFWRLSFSEEGNENKKNEDILKPVVYNLDAKRHGRRERERERKDIGLREERKLVNETKSAKELECLKRRYERKAQRVLQEQLLNLEKAEEEAEFASSKFLEKDELQFTSPRTICTPRKHLFPSSIDAKISGLGSIREGSVSEELKGKFNKQRKSLHVSRELQRRKPKHSSKVRVYSPRMASKVEICKIKAIEEKKKAKLKMKTEEEIVEENVGLDHFAVVKCSLDPQQDFRDSMIEMITEKQISKPEEMEELLACYLTLNSNEYHDLIIKVFRQVWLYLSQASLGIKSDKQCCCYD. 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05934 372 MobiDBLite consensus disorder prediction 37 63 - -
Seca12g05934 372 Pfam Transcriptional repressor, ovate 299 355 IPR006458 -
Seca12g05934 372 MobiDBLite consensus disorder prediction 45 61 - -
Seca12g05934 372 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 147 356 IPR038933 GO:0045892
Seca12g05934 372 Coils Coil 129 174 - -
Seca12g05934 372 NCBIfam uncharacterized plant-specific domain TIGR01568 294 356 IPR006458 -
Seca12g05934 372 ProSiteProfiles OVATE domain profile. 295 354 IPR006458 -
Seca12g05934 372 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05934 Seca-Chr12 151141124 151142326 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca12g05934 Ovate 8.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05934 - - aprc:113859996 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05934 12 151141124 151142326 Seca12g05934 12 151141124 151142326 ECH