Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05902 ATGAGGAATTGTGATGAATGGAAACCATTTCTAGTAATGATAGCAATTGATGTTTCTTTCACCATAGTGAATATTCTTCTCAAGAAAGTCCTTGAAGAAGGAATGGACCATTTGGTTTTTATCACATATCGTTTGTCAATTTCTACCATATTTTTAGTCCCAATCAGCTACTTTTGGGAAAGAAATCAAAGACCAAGGCTCACATTTCAAATTTTATGTTTCCTTTTCCTCAGTGCTATTGTTGGGGCATCCATCACACAATACTTCTTCCTTCTGGGGATCCAATACACCTCGGCTACCTTTGCTTGTGCCTTTGTCAATATGGTGCCTGTGGTCACTTTCATTATGGCATTACCATTTGGATTAGAGACTGTGAACATTAAATGCAACAGTGGGAAAGCAAAGATTCTTGGTACATTTGTGTGCATAGGAGGGGCATTGTTGTTGACACTTTACAAAGGAAAGCCATTGTTTGATTATTCTCACCATCACTCAGCAGCTTCAGCAGTAACCATGAATTCTGCAATGAAGCAAGCTTCTAGTACTAGAATAACTGAGAAGTGGACCATTGGTGTAATAGCTTTGATTATGGGAACCCTCTTTTGGTCTTCTTGGTTTATTTTACAATCGTATATAGGTAAGAGGTACCCATGCCAGTATTCCAGCACAGCCATCTTGACCTTCTTTGGAGCCATACAATCAGCTATCCTTGGCTTGTGCACTGGCAGGAACTTGTCCATGTGGGTTCTCAAGGGAAAGATACAAATAATCACCATTCTGTATTCTGGGATGGTTGGATCAGGTATATGCTATGTGGGGATGTCATGGTGTGTCAAGAAGAGGGGTCCTGTTTTCACTGCAGCATTCAGCCCTCTTGTTCAGATAATGGCAGCAGTAATTGATATCCCAGTCTTGCATGAGGAGCTCCATCTTGGAAGTGTGGTGGGGTCCATGATGGTGATGATCGGATTATACATTCTTCTATGGGGTAGGAGCGAGGAGATGAAGCAGAATGGTGGGGAAAAGTTAGTCCAAGAAGTTGAAGAAATGAAGGAACAAGAGCCGAAAGTACAACATGTTGTTGTCTCCTGTGATTCACGGTGTCACTGA 1110 0.4153 MRNCDEWKPFLVMIAIDVSFTIVNILLKKVLEEGMDHLVFITYRLSISTIFLVPISYFWERNQRPRLTFQILCFLFLSAIVGASITQYFFLLGIQYTSATFACAFVNMVPVVTFIMALPFGLETVNIKCNSGKAKILGTFVCIGGALLLTLYKGKPLFDYSHHHSAASAVTMNSAMKQASSTRITEKWTIGVIALIMGTLFWSSWFILQSYIGKRYPCQYSSTAILTFFGAIQSAILGLCTGRNLSMWVLKGKIQIITILYSGMVGSGICYVGMSWCVKKRGPVFTAAFSPLVQIMAAVIDIPVLHEELHLGSVVGSMMVMIGLYILLWGRSEEMKQNGGEKLVQEVEEMKEQEPKVQHVVVSCDSRCH. 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05902 369 PANTHER WAT1-RELATED PROTEIN 8 341 IPR030184 GO:0016020|GO:0022857
Seca12g05902 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 332 - -
Seca12g05902 369 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020
Seca12g05902 369 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Seca12g05902 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05902 Seca-Chr12 150820223 150822442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05902 7 262 Nodulin-like Gene Family AT3G30340 51.172 4.03e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05902 - - gmx:100791663 587.03