Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g05887 | ATGGAAATTAAATGGGAAACATTTGGATTATGGTTCAGAATTTATGTTGGATTGATTTCTCTGTGGGGAATTCAACAGTGTTGGTCTCTTAATGATGAAGGGTTGGCTTTGATGGAATTTAGGGGAAGAATAACTTCTGATCCTTATGGTGCTCTGGCAAATTGGAATCCAAATGATTGCAACCCTTGCAAGTGGTCAGGTGTTCATTGTGTTGACGGTAAAGTGCAAATGCTGGACCTAACTGGGCTATCATTGGAAGGGACATTGACACCTCATCTTGGGAAACTTAATCACTTGAAATCTCTTGTTTTGTGCAAGAACAATTTTTCTGGGACCATTCCCAAAGAACTTGGAGATCTAGACAAGCTGGAGTTGTTGGATTTACGGGAAAATAGCTTAACTGGAAGTATCCCAGCAGAAATTGGCAGGAAATCATTGTTAAAACAATTGTTGGATTGTGACAATAAAATTGAAGGCTGTGATGCTCAAGTGCTCAGAAAGATCAGATTGCTCTCTAAATCACTATTTGTTGACAATTATTCATCAACTCTGACAAGTTCATTTCACTGCAAGAATAGAAAGTTTGTTCACTGTGCGTGGCATAGAGAATTCAAGCAATGGAGCAAGGCAGAGTCATTGGCTATTCCAATTAAAGGAGCAGTTAAAAAATACCTTAATGCCCTAGTGCTGCCACTGTTCAAGCCAGGAAAGGCTGCCCCTCATGGCTATGTAGAGAACTACCTTGACAATCTGCCTAATTCTGATGAGTCAGAGATTGTCCAGAATGTATCAAATCTAGTCAATTCTGCACGTCGTAAGTTACTTGATCAATCCAGCAACCTTGCAGCTGCACCTTATAGTGGTGGGCCTACTACACAGATCAGTTCTGTTCCAACTACCCTGAGTAGTGGAGCTTTCCCAGCTGTGCCAGATGTCAATAAAAAACAAAATCAGTCACCTGCACCACTTCCTTCATCTTCTAATTCTCCAGATGATACTTCTGATCAGACAAGTCAACAAAATTCAGCTAATGGTGCTCCAGGAAAATTGTGGAAGTATATTATTATTATCTTAGGTGTGGCTGTCTTGGTCATTGTTATTCTGGTCATACTTTGCATATGGCGAAAACGAGCAGCAAAAGTAATAAAGCCCTGGAAAACAGGAATAAGTGGACAATTGCAGAAAGCATTTGTAACAGGAGTCCCCAAGTTGAATAGAGCAGAGTTGGAGACAGCCTGTGAAGATTTCAGCAATATCATTAATAGTTTTGATGAGTGCACCATATACAAAGGAACACTGTCAAGTGGAGTCGAGATTGCTGTTGATTCTACTATGGTTACTTCTGCCCAGGAGTGGTCAAAGAACATGGAGATGGCCTATCGGAAAAAGATTGATACTCTGTCTCGTGTTAACCATAAGAATTTTACCAATCTTATTGGGTACTGTGATGAAGAAGAACCATTTACAAGGATGATGGTGTTTGAGTATGCTCCAAATGGAAGCGTTTTTGAGCATCTGCACGTCAAGGAAGTTGAACATCTTGATTGGAGTGCAAGAATGAGAGTTATTATGGGCACGGCTTATTGTCTTCAGTACATGCACCATGATCTGAATCCACCAGTTGCTCATTCCAACCTTAATTCACTTTCTATATTGTTAACAGATGACTATGCAGCTAAGATTTCAGAGATCAGTTTTGGCACCAAAGTACTATCACCAGGCAACACAACTGGAGATGAATCAAAGAAATCTGAGTTGCCACCTCCTGCTGATCCTGAAACTGATGTCTATAACTTCGGAGTATTGTTGCTTGAAATCATTTCTGGGAAACTACCTTACTCTGAAGAACAAGGCCACCTTGTGAACTGGGCTGCTGAGTACTTGAATGATAAGCAAAGCATCAACTATTTGATAGATCCCACACTGAAGTCCTTCAAAGACAATGAACTTGGTGTCATCTGTGAGGTGATCCAAGATTGTCTTCAATCTGATACAAGGTTAAGGCCATCAATGAAAGACATAACTTCCAAATTGAGGGAAGTGCTTTCTATATCACCTGAGCAAGCAGTCCCAAGACTTTCTCCACTGTGGTGGGCTGAATTGGAGATCTTGTCTGTGGAGGCCCCTTGA | 2130 | 0.4085 | MEIKWETFGLWFRIYVGLISLWGIQQCWSLNDEGLALMEFRGRITSDPYGALANWNPNDCNPCKWSGVHCVDGKVQMLDLTGLSLEGTLTPHLGKLNHLKSLVLCKNNFSGTIPKELGDLDKLELLDLRENSLTGSIPAEIGRKSLLKQLLDCDNKIEGCDAQVLRKIRLLSKSLFVDNYSSTLTSSFHCKNRKFVHCAWHREFKQWSKAESLAIPIKGAVKKYLNALVLPLFKPGKAAPHGYVENYLDNLPNSDESEIVQNVSNLVNSARRKLLDQSSNLAAAPYSGGPTTQISSVPTTLSSGAFPAVPDVNKKQNQSPAPLPSSSNSPDDTSDQTSQQNSANGAPGKLWKYIIIILGVAVLVIVILVILCIWRKRAAKVIKPWKTGISGQLQKAFVTGVPKLNRAELETACEDFSNIINSFDECTIYKGTLSSGVEIAVDSTMVTSAQEWSKNMEMAYRKKIDTLSRVNHKNFTNLIGYCDEEEPFTRMMVFEYAPNGSVFEHLHVKEVEHLDWSARMRVIMGTAYCLQYMHHDLNPPVAHSNLNSLSILLTDDYAAKISEISFGTKVLSPGNTTGDESKKSELPPPADPETDVYNFGVLLLEIISGKLPYSEEQGHLVNWAAEYLNDKQSINYLIDPTLKSFKDNELGVICEVIQDCLQSDTRLRPSMKDITSKLREVLSISPEQAVPRLSPLWWAELEILSVEAP. | 710 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g05887 | 709 | MobiDBLite | consensus disorder prediction | 572 | 591 | - | - | |
Seca12g05887 | 709 | FunFam | Nuclear pore complex protein NUP107 | 30 | 189 | - | - | |
Seca12g05887 | 709 | SUPERFAMILY | L domain-like | 28 | 184 | - | - | |
Seca12g05887 | 709 | Gene3D | Transferase(Phosphotransferase) domain 1 | 497 | 690 | - | - | |
Seca12g05887 | 709 | Pfam | Protein tyrosine and serine/threonine kinase | 427 | 678 | IPR001245 | GO:0004672|GO:0006468 | |
Seca12g05887 | 709 | PANTHER | PROTEIN MALE DISCOVERER 2 | 16 | 707 | - | - | |
Seca12g05887 | 709 | Pfam | Leucine rich repeat N-terminal domain | 31 | 70 | IPR013210 | - | |
Seca12g05887 | 709 | Gene3D | Phosphorylase Kinase; domain 1 | 390 | 496 | - | - | |
Seca12g05887 | 709 | MobiDBLite | consensus disorder prediction | 308 | 344 | - | - | |
Seca12g05887 | 709 | Gene3D | Ribonuclease Inhibitor | 29 | 220 | IPR032675 | - | |
Seca12g05887 | 709 | ProSiteProfiles | Protein kinase domain profile. | 379 | 682 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g05887 | 709 | SUPERFAMILY | Protein kinase-like (PK-like) | 402 | 678 | IPR011009 | - | |
Seca12g05887 | 709 | MobiDBLite | consensus disorder prediction | 312 | 344 | - | - | |
Seca12g05887 | 709 | FunFam | Inactive receptor-like serine/threonine-protein kinase | 388 | 496 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g05887 | Seca-Chr12 | 150611818 | 150618609 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g05887 | 85 | 681 | Receptor kinase-like Gene Family | AT5G56040 | 26.923 | 1.57e-46 | 176 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-2 | Seca12g05887 | PK_Tyr_Ser-Thr | 1.2e-19 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g05887 | - | - | gmx:100808098 | 1035.79 |