Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05875 ATGGCGTCCACCAGAGAACGTGAAAACTTCGTCTACATCGCCAAGCTCGCTGAACAAGCCGAGCGCTATGAAGAAATGGTGGATGCAATGAAGAATGTGGCGAAGCTAAATGTTGAGTTGACTGTTGAGGAGCGAAACCTTCTTTCGGTTGGTTACAAGAATGTAGTGGGTGCTCGTAGGGCTTCATGGAGGATTCTATCCTCAATTGAGCAGAAGGAAGAAGCTAAAGGGAACGATGTGAGTGTGAAGCGGATAAAGGAGTATAGGCAGAAGGTGGAATCTGAATTGTCCAATATATGCAATGATATCATGACTGTTATTGATGAGCACCTTATTCCCTCAAGCACTACTGGTGAACCTAGTGTGTTTTTCTATAAAATGAAAGGGGACTATTATCGGTATCTGGCAGAATTTAAGTCTGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCATATCAGGTCTGCTTGTATTTAGACCTCTTGTATCTCTCTGTTTTAAAAGGTCTTGATGTTTGTTACCAATCATGCCTGACGGCTTCCACTACAGCAGAGGCTGAGTTACCTCCTACTCATCCCATTCGATTGGGTTTGGCTTTGAACTTCTCTGTCTTTTATTATGAAATTTTAAACTCTCCTGAAAGGGCATGTCACCTTGCTAAGCAGGCCTTTGATGAAGCAATCTCTGAGCTGGATACTCTAAGTGAGGAGTCATATAAAGACAGCACACTAATTATGCAGCTTCTGAGGGACAACCTCACCTTGTGGACTTCTGACATCCCTGAAGATGGAGCTGAGGAACAAAAGGTGGAGTCTGCCCGGGCAGCTGGAGGTGAAGATGAATAG 852 0.4413 MASTRERENFVYIAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIKEYRQKVESELSNICNDIMTVIDEHLIPSSTTGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADHSMKAYQVCLYLDLLYLSVLKGLDVCYQSCLTASTTAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGAEEQKVESARAAGGEDE. 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05875 283 ProSitePatterns 14-3-3 proteins signature 2. 241 260 IPR023409 -
Seca12g05875 283 PIRSF 14-3-3 173 272 IPR000308 -
Seca12g05875 283 PIRSF 14-3-3 1 163 IPR000308 -
Seca12g05875 283 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Seca12g05875 283 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Seca12g05875 283 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Seca12g05875 283 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Seca12g05875 283 Coils Coil 13 33 - -
Seca12g05875 283 MobiDBLite consensus disorder prediction 264 283 - -
Seca12g05875 283 SUPERFAMILY 14-3-3 protein 6 261 IPR036815 -
Seca12g05875 283 MobiDBLite consensus disorder prediction 261 283 - -
Seca12g05875 283 Gene3D - 1 274 IPR036815 -
Seca12g05875 283 SMART 1433_4 7 272 IPR023410 -
Seca12g05875 283 Pfam 14-3-3 protein 181 259 IPR023410 -
Seca12g05875 283 Pfam 14-3-3 protein 14 157 IPR023410 -
Seca12g05875 283 PANTHER 14-3-3 PROTEIN 7 262 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05875 Seca-Chr12 150453819 150457712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05875 1 282 14-3-3 family AT2G42590 71.930 2.40e-149 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05875 K06630 - gmx:100807980 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05875 12 150453819 150457712 Seca12g05875 12 150453819 150457712 ECH