Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05808 ATGAAGGCAGATTTTTCCTTGACATATTCATCAACATCAATTCTGGCTGTTGGTTTCTTCATTGTCTATACCCACCTCATCAAAATGACAGCATGCACTATAACTGCCCTCTTTTGCAAGATCCCCTTGAAAGATGCCTTGACTCTTGGCCTCATTTTGAACTGCAAAGGTGTAGTGGATGTTGGCCTCTTCAATGGCTTATATGATGAAAAGGCTATTTCGTCCCAAACTTATGGAGTGATGGTAATCAGCATAATGATCATAGCATGCATAGTGAAATGGTCTGTGAAGATTTTGTATGATCCATCAAGAAAATATGCTGGCTACCAGAAAAGGAACATCATGAATTTAAAACCAGACTCAGACCTGAGAATAGTTGCTTGCCTTCATAAACAAAACAATATAACTGCTATAACAGATGTCCTTGACCTTTGTTCTCCATCAACAGAACACCCTATCATTGTGGATGTATTGCATCTAATAGAGCTAGTTGGAAGGACCACTCCCATTTTCATTTCCCATCGTCTTCAAAGAACAGTTTCAGGTGCCCACAAGTCTTATTCAGATGATGTCATTCTTGCTTTTGACCTCTTTGAACATGACAACCGTGGTGCAGCAACTGCACACATCTACACAGCCATATCTCCACCATCCCTGATGCATGAAGATGTTTGTCAACTTGCATTGGACAAAGTTGCATCCATCATAATTCTTCCATTCCATAAAAAGTGGTCCATTGATGGAGGCATTGAATCTGATGACAAGAACATAAGGTCCTTAAATTGTAAAGTCCTAGAAGTGGCTCCATGCTCAGTAGGAATCCTTGTGAGCCGTTTTTCCTTACAAAATAACTCATTCATTCAGTTAGCCATGGTTTATTTGGGTGGTAAAGATGACAGAGAAGCTTTGTGCTTAGCTAAAAGAGCAGTTAAGAATCCAAGGATCAACTTGGTTGTGTACCACCTTACTCCTGAGGAACACGTACCAAACATGGAGTATATACTAGATAATGAGGCTCTACATGAAGTTAAGAATCCACATAATGGCTTGGATAATGTAAGTTACCAAAGAATCACAGTAAATGATGGACCAGAGACATCTGCTATTCTCCGTGACTTAGCATATCAGCATGACTTTTTCATAGTTGGGAGGAGACATGGGTTAGAATCACCTCAGACAGAAGGACTTACAAATTGGAGTGAATTTTCAGAGTTAGGTGTCATTGGTGATTTGCTTGCTTCTCCAGATTTTGAAAGCCGAGCAGGTGTTTTGGTAGTGCAGCAACAAGTCAAAGATTAG 1299 0.4003 MKADFSLTYSSTSILAVGFFIVYTHLIKMTACTITALFCKIPLKDALTLGLILNCKGVVDVGLFNGLYDEKAISSQTYGVMVISIMIIACIVKWSVKILYDPSRKYAGYQKRNIMNLKPDSDLRIVACLHKQNNITAITDVLDLCSPSTEHPIIVDVLHLIELVGRTTPIFISHRLQRTVSGAHKSYSDDVILAFDLFEHDNRGAATAHIYTAISPPSLMHEDVCQLALDKVASIIILPFHKKWSIDGGIESDDKNIRSLNCKVLEVAPCSVGILVSRFSLQNNSFIQLAMVYLGGKDDREALCLAKRAVKNPRINLVVYHLTPEEHVPNMEYILDNEALHEVKNPHNGLDNVSYQRITVNDGPETSAILRDLAYQHDFFIVGRRHGLESPQTEGLTNWSEFSELGVIGDLLASPDFESRAGVLVVQQQVKD. 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05808 432 PANTHER CATION/H + ANTIPORTER 13 430 - -
Seca12g05808 432 Gene3D - 1 107 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05808 Seca-Chr12 149737357 149739064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05808 4 429 Antiporter Super Family AT5G22900 41.163 8.03e-113 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05808 K26731 - gmx:100797995 638.262