Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05793 ATGATTGAAGATTTTATTTTTAATATGATGGAACCTATTGAAACTGACAAAACTTTTGAGGGTGATCCCAAAAATTCTAAATCCCCCAATAAAGATAATTTGGATTCTGATAAGGATCCTGAAGTTTGGAAAAGGATAAGTGAACTAACAGATGAGGATATTAGAGGGCTTGAGTTTGATACTGAAGAGGATGCATATGATTTCTACCGTGAGTATGCTAAATTCATAGGATTTTCTGTAAGGAAAGGTGATGTGTATAGAAATTGTAATGGTACAATTACAATGAGGCAATTGGTTTGTAATAGAGAGGGAGAGAGAAGTGAGAAGCATCTTAATAGGACTGATAGAATTAGGGAGGCAAAGGCCCTCACCCGAACTGAGTGCAAAGCAAGGCTCCGTGTTTCCTTAGATTATAGAAGTAGAAAGTGGAGGGTTGGAATCTTTGAGCCAGCTCATAACCATGAATTGACTCTTGCAAGTATGATACATTTGCTACCTGCTTATCGTGGGTTGAGTGTAGCGGATAAGGCACAAGTTGACGGTCTACATCATTACGGTGTCAGGACTTGTCATATAATGGGTCAAAAGGGAGGTTATTCTGATCTTGGTTTCTGTAAGAAGGATTTGTACAATCATATTGATAAAGAGAATCGGGAAAAAATAGAGGATGGGGATGCATTTGCTGCGTTATGCTACCTTCAATCTTAG 708 0.3828 MIEDFIFNMMEPIETDKTFEGDPKNSKSPNKDNLDSDKDPEVWKRISELTDEDIRGLEFDTEEDAYDFYREYAKFIGFSVRKGDVYRNCNGTITMRQLVCNREGERSEKHLNRTDRIREAKALTRTECKARLRVSLDYRSRKWRVGIFEPAHNHELTLASMIHLLPAYRGLSVADKAQVDGLHHYGVRTCHIMGQKGGYSDLGFCKKDLYNHIDKENREKIEDGDAFAALCYLQS. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05793 235 Pfam FAR1 DNA-binding domain 67 157 IPR004330 -
Seca12g05793 235 MobiDBLite consensus disorder prediction 14 39 - -
Seca12g05793 235 MobiDBLite consensus disorder prediction 15 39 - -
Seca12g05793 235 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 31 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05793 Seca-Chr12 149592154 149592861 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g05793 FAR1 3e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05793 - - ccaj:109792835 234.187