Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05757 ATGTTGAAGACATCTGGAAAATTGATTTTCGTAGGTGCATCAGTCACACCTCCTGCGTTGCCATATATGCCTTTGATGTTGGGGAGGAAGATAATTGTTGGGAGTGCTGGTGGAGGGATGAAAGAGAGCCAGAACATGATTGATTTTGCAGCAAAGCACAATATCACAGCAGATATTGAGCTAATTCCCATGGATTACGTGAATACTGCTTTAGAATGA 219 0.4201 MLKTSGKLIFVGASVTPPALPYMPLMLGRKIIVGSAGGGMKESQNMIDFAAKHNITADIELIPMDYVNTALE. 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05757 72 Gene3D - 58 72 - -
Seca12g05757 72 PANTHER ALDEHYDE REDUCTASE 1 72 IPR047109 GO:0016616
Seca12g05757 72 Gene3D - 1 57 - -
Seca12g05757 72 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 55 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05757 Seca-Chr12 149214433 149214730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05757 3 72 Monolignol Biosynthesis Gene Families AT4G37990 62.857 1.06e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05757 - K23232 pavi:110772154 115.161