Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05730 ATGTCAAGGGAGGACTTGAGGAAATGGTTTCTTTCTATGGAATCTGCACTTTTTCGCTACCGTTTTCGTCTTCTAACTGCTGAAGCTCAGGTAGAATCTGTCTATACTGCATCTATTTTGCATTTCAAGTTAGGTACTAATTTATCATGTACTTTGCTTGTAACTTCACAGAGGGCAATCTTGGATGAATTTGACCTTCCATACAAGGTTGTTAGCAATATGGAATTTGAGAGCATAAAAGAGAAATTGGGGCAAGTTGCGCGTTCCATGGGTCAGCAATCACCCACTGCTGATTCTATCTTCTACAAGGTACCATTTGAAGAAGTTCCAGAGCTTGTAGCTGGACGGAGGGTGTTTATAAATCAAGGATATGCATATGTTGCAATGCATCAGGTTGTTTCACTTGTCACCACACTATTTCGCAGTCAACTGTCAAAGGCACTTATCCTTACAAACAGAAAATGGACATCTTCAATTAGAGAACAAGAGAAACATAGGTTGACTCCTATTGTGGAAGCCTTGTGCTCAAGTTATCTGGGTCCTGATTTTTCTCAGCCGAGAGAATATGCTGAGATATCATTAAAGGACATTGATCAAGTTGCCAAGAGCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAGAGAAGATCATCATTTAAAGCACGGAGGGAGGATGCAACTGGGCCTCTTTCTCAAGGGTGTTGGCTTGAACCTGGATGATGCACTTGCGTTTTGGAGAGCTGAGTTCTCTAAAAAGGTTGGTTTGGAGAAGTTCGAGAAAGAATATGCATATAATATACGCCATAATTATGGAAAGGAAGGGAAGAGAACTGATTATACTCCCTATTCTTGTCAAAAGATTATTTCATCAACCCCTGGTGCTGGAGATCAGCATGGTTGCCCCTATCGACATTTCAGTGAAGAGAATCTAAGAGCCGCCCTCAGCAGAATGGGGGTGAACAGTCGAGCAATGGAAGATGTAATGGACAAAGTGAGAAATAGACATTATCAGTTAGCTTGCACCTTGACATTTGAAGCTCTTCACGGCATGCCATGTGATGCAGGGATTAACCATCCAAATCAGTACTTCAGTGACAGTCAGAAGATATTGCAGCCAAAGAAGGATTCTTCAGCCTAA 1146 0.4171 MSREDLRKWFLSMESALFRYRFRLLTAEAQVESVYTASILHFKLGTNLSCTLLVTSQRAILDEFDLPYKVVSNMEFESIKEKLGQVARSMGQQSPTADSIFYKVPFEEVPELVAGRRVFINQGYAYVAMHQVVSLVTTLFRSQLSKALILTNRKWTSSIREQEKHRLTPIVEALCSSYLGPDFSQPREYAEISLKDIDQVAKSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRAEFSKKVGLEKFEKEYAYNIRHNYGKEGKRTDYTPYSCQKIISSTPGAGDQHGCPYRHFSEENLRAALSRMGVNSRAMEDVMDKVRNRHYQLACTLTFEALHGMPCDAGINHPNQYFSDSQKILQPKKDSSA. 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05730 381 Gene3D - 1 174 - -
Seca12g05730 381 PANTHER DNA PRIMASE LARGE SUBUNIT 3 377 IPR007238 GO:0006269
Seca12g05730 381 CDD PriL_PriS_Eukaryotic 4 369 IPR016558 -
Seca12g05730 381 Pfam Eukaryotic and archaeal DNA primase, large subunit 101 366 IPR007238 GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05730 Seca-Chr12 149008949 149017156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05730 4 376 Core DNA Replication Machinery Family AT1G67320 65.037 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05730 K02685 - gmx:100806321 654.825