Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05708 ATGGTTAAGGAAGGGTATGAGTTGATTTCGGAGTTTAATTTGGAGGATTATTTTCCTTTGAAGTTTTTGGATTTTCATGGGGTGAAGAGAAGGTGTCATAAATTGGCGGGTAAGGTTACTAGTTTGGTTGGTCGAATTGTGGAAGAAAGAAAAAGAGGTGAGGTGGAGTTGGTTGGGAAGAATGATTTTCTTACCACTTTGTTGTCCTTGCCTAAAGAGGAAAGATTGGGTGATTCAGATATGGTGGCTATTCTGTGGGAAATGATATTTAGAGGAACAGACACAGTTGCTATACTTCTGGAATGGATAATGGCGAGGATGGTTTTACACCAAGACATACAAATGAAAGCCCGCCAAGAGATTGACACGTGCATAGGCCAAAACGGTCACGTGCGAGACGCCGACATTCCGAATCTCCCTTACCTCCAGGCCATAGTAAAGGAGGTTCTCCGGCTACACCCACCAGGCCCATTGCTATCCTGGGCCCGCCTCGCAGTCCATGATGTCCACGTGGATAAAGTCCTTGTGCCAGCTGGTACAACAGCAATGGTTAACATGTGGGCGATATCTCATGACTCCTCTATATGGGAAGACCCATGGGCTTTTAAGCCCGAGAGGTTCCTCAAAGAAGACGTGTCTATCATGGGATCAGATTTGAGACTTGCACCGTTCGGTGCAGGACGTAGGGTATGCCCGGGTAGAGCCTTGGGCTTAGCCACGGTCCATCTCTGGCTCGCACAACTTCTTCATAACTTCATATGGCTTCCAGCACAACCCGTGGATCTTTCGGAATGCCTTAGGCTTTCTCTTGAAATGAAGACACCTCTTAGATGTCTTGTGGTTCGTAGATAA 852 0.4683 MVKEGYELISEFNLEDYFPLKFLDFHGVKRRCHKLAGKVTSLVGRIVEERKRGEVELVGKNDFLTTLLSLPKEERLGDSDMVAILWEMIFRGTDTVAILLEWIMARMVLHQDIQMKARQEIDTCIGQNGHVRDADIPNLPYLQAIVKEVLRLHPPGPLLSWARLAVHDVHVDKVLVPAGTTAMVNMWAISHDSSIWEDPWAFKPERFLKEDVSIMGSDLRLAPFGAGRRVCPGRALGLATVHLWLAQLLHNFIWLPAQPVDLSECLRLSLEMKTPLRCLVVRR. 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05708 283 PRINTS E-class P450 group IV signature 190 208 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05708 283 PRINTS E-class P450 group IV signature 231 249 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05708 283 PRINTS E-class P450 group IV signature 139 155 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05708 283 PRINTS E-class P450 group IV signature 215 231 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05708 283 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 224 233 IPR017972 GO:0005506|GO:0016705
Seca12g05708 283 SUPERFAMILY Cytochrome P450 3 283 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05708 283 PRINTS P450 superfamily signature 144 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05708 283 PRINTS P450 superfamily signature 231 242 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05708 283 PRINTS P450 superfamily signature 91 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05708 283 PRINTS P450 superfamily signature 222 231 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05708 283 PANTHER CYTOCHROME P450 78A7-RELATED 1 283 - -
Seca12g05708 283 Pfam Cytochrome P450 3 262 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05708 283 Gene3D Cytochrome P450 5 283 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05708 Seca-Chr12 148713165 148714621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05708 1 283 Cytochrome P450 AT1G13710 62.500 7.65e-127 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05708 - - gmx:100784757 519.62