Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05659 ATGGGTTTATGTTTTCTCTTTCTGGTTATACTTCCTTTGTTGACATCATTTGCAATTTGCCAACTTGAAGAATTTGTTAGCATTGACTGTGGAGGGACAAGTAATTACACTGATAGAAACACTGGTTTGGCATGGATTTCAGACTCTGAGATCATGCAACATGGCACTCCAGTGGTAGTAGAAAGTCCAAATGGAAGCATGGTACAATATCAAAATCGTAGAGACTTTTCCATAGATAACAAGAAATATTGTTACACACTAAGCACAGAGGAGAGAAGAAGATACCTAGTGCGTGCAACGTTTCAATATGGAAGCTTGGAAAATGGAGACACATACCCTCAGTTTCAGCTCTACTTGGATGCAACCAAATGGACTACTGTGTCAATATATGATGCCTCAAGAATATATGTTAAGGAAATGATCATAAGGGCACCCTCAAATTCTATTGATGTCTGCATGTGTTGTGCTACAACTGGTTCTCCTTTTATATCTACTCTTGAGTTAAGGCCCTTGAATCTTTCAATGTATGCCACAGATTTTGAGGACAATTTCTTCTTAGAAGTAGCTGCAAGAATAAACTTTGGTGCTACTAGTGAGGATGCTGTCAGGTACCCAGATGATCCATATGATAGAATTTGGGAATCTGATCTTATTAGAAGGCAAAATTATCTTGTTGGTGTGGCCCCAGGCACAGAAAGAATTAGCACAACAAAGAACATAGAAATAGGGACAAGAGAATATCCACCTGTTAAAGTTATGCAAAATGCAGTTGTTGGCACAAAAGGAGTACTCAGCTACAGATTAAACCTTGAAGACTTCCCTGCTAATGCTAGAGCTTATGCATATTTTGCTGAGATTGAAGATCTGGGTAAGAATGAGACTAGAAAATTCAAATTACAGCAACCTTATATACCTGACTATAGCAATGCAGTGGTTAACATTGCTGAGAATGCCAATGGGAGCTACATTCTATATGAACCAAGTTATATGAATGTGACTCTAGAATTTGTTCTGTCATTCTCTTTTGTTAAGACCCCAGATTCTACTCGAGGACCTCTTCTAAATGCATTGGAAATAAGCAAATATGTACAGATTGCTTCAAAGACAGATAAGCAAGACTTAACTGTTGTAAATGCATTAGGATTCTTGTCTGCTGATAGTTTCCAAACAAATGAAGGTGATCCTTGTGTTCCAACTCCCTGGGAATGGGTGAATTGTAGTACCACTGCACCACCAAGGATTACAAAAATATTTCTTTCAAGAAGGAATGTGAAGGGTGAAATACCACCTGAGCTCAACAACATGGAAGCATTAACAGAGTTGTGGTTAGATGGCAACTTGCTTACAGGACCATTACCTGACATGGGCAATCTTATAAATCTAAAGATTGTGCATCTAGAGAACAACAAATTGATTGGTCGACTACCATCTTACCTGGGTAGTTTGTCAAGCTTACAAGCTCTGTTCATACAAAATAACTCATTTAGTGGGGAAATACCAACCAGATTAATATCTGGAAAAATCATTTTCAACTATGATGGTAATCCTGGACTATATAGAGAAAGCAAGAGGCACTTTAAGTTGATACTTGGAATTTCAATTGGAATATTAGTGATTCTATTAATATTATTCTTAGGAAGTTTAGTGCTATTGCATAATATGAGAAGAAAGACATCTCATCAGAAACGTGAGGAAAAAGGAATTTCTGGACGCACTAACAGTAAACCTTTAACTGCATATTCATCTGTTCGAGGTGGAAATATAATGGATGAAGGTACTACTTGCTATATTACACTCTCAGAGTTGAAAGAAGCTACTAACAATTTTTCAAAGCAAATTGGCAAAGGAAGCTTTGGATCTGTGTACTATGGGAAAATGGGAGATGGAAAAGAGGTGGCAGTTAAAAGTATGACTGATTCATCCAGCCATGGAAACCAGCAATTTGTTAATGAGGTAGAGTTCAAATTCATCCCTTTAGTATTTTCATATTCAAATTCTAATAGAGAACAGGTAGCCCTCCTATCAAGAATTCATCACAGAAATTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATATCAGCATCTTCTGGTTTATGAATATATGCACAATGGCACTTTACGGGATCACATTCATGAATGTTCCAAGAAGAAGAACTTAGATTGGATAGCTCGTCTTCGTATTGCAGAAGATGCAGCTAAAGGTCTTGAATACTTACACACAGGATGTAATCCTAGTATCATTCACCGAGATGTAAAGACAAGCAACATTCTCCTAGACATCAATATGAGAGCAAAAGTTTCAGACTTTGGACTCTCTAGATTAGCTGAAGAAGATTTAACACATATATCAAGCATTGCAAGGGGAACTATTGGCTACCTAGATCCTGAGTACTATGCAAATCAGCAATTGACAGAAAAGAGTGATGTGTATAGTTTTGGAGTTGTTCTGCTGGAACTGATATCTGGAAGAAAGCCTGTGATATCAGAAGATTATGGTGCTGAAATGAACATTGTTCATTGGGCTAGATCATTAATTTGTAAAGGAGATGTGATGAGCATCATTGACCCTTCTCTGGTTGGGAATGTCAAAAGTGAGTCCATTTGGAGGGTGGTTGAAATTGCCATGCATTGTGTAGCACAACATGGTGCCTCCAGGCCAAGGATGCAAGAAATCATTTTGGCTATACAAGATGCAATCAAGATTGAAAAAGGATCAGAAAATAAGCTAAAATCATCATCTTCAGGTAGTAGTAGTTGTTCAAAACCACATTCTTCCCGGAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGCCCTGACTTATCAAATGGTTGTCTCCCATCAGCAAGATAA 2856 0.3761 MGLCFLFLVILPLLTSFAICQLEEFVSIDCGGTSNYTDRNTGLAWISDSEIMQHGTPVVVESPNGSMVQYQNRRDFSIDNKKYCYTLSTEERRRYLVRATFQYGSLENGDTYPQFQLYLDATKWTTVSIYDASRIYVKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLEVAARINFGATSEDAVRYPDDPYDRIWESDLIRRQNYLVGVAPGTERISTTKNIEIGTREYPPVKVMQNAVVGTKGVLSYRLNLEDFPANARAYAYFAEIEDLGKNETRKFKLQQPYIPDYSNAVVNIAENANGSYILYEPSYMNVTLEFVLSFSFVKTPDSTRGPLLNALEISKYVQIASKTDKQDLTVVNALGFLSADSFQTNEGDPCVPTPWEWVNCSTTAPPRITKIFLSRRNVKGEIPPELNNMEALTELWLDGNLLTGPLPDMGNLINLKIVHLENNKLIGRLPSYLGSLSSLQALFIQNNSFSGEIPTRLISGKIIFNYDGNPGLYRESKRHFKLILGISIGILVILLILFLGSLVLLHNMRRKTSHQKREEKGISGRTNSKPLTAYSSVRGGNIMDEGTTCYITLSELKEATNNFSKQIGKGSFGSVYYGKMGDGKEVAVKSMTDSSSHGNQQFVNEVEFKFIPLVFSYSNSNREQVALLSRIHHRNLVPLIGYCEEEYQHLLVYEYMHNGTLRDHIHECSKKKNLDWIARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTIGYLDPEYYANQQLTEKSDVYSFGVVLLELISGRKPVISEDYGAEMNIVHWARSLICKGDVMSIIDPSLVGNVKSESIWRVVEIAMHCVAQHGASRPRMQEIILAIQDAIKIEKGSENKLKSSSSGSSSCSKPHSSRKTLLTSFLEIESPDLSNGCLPSAR. 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05659 951 Gene3D Phosphorylase Kinase; domain 1 662 701 - -
Seca12g05659 951 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 702 909 - -
Seca12g05659 951 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Seca12g05659 951 Gene3D Phosphorylase Kinase; domain 1 586 657 - -
Seca12g05659 951 Pfam Protein kinase domain 610 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g05659 951 Pfam Malectin-like domain 28 361 IPR024788 -
Seca12g05659 951 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 409 499 - -
Seca12g05659 951 PANTHER OS07G0107800 PROTEIN-RELATED 457 900 - -
Seca12g05659 951 SMART serkin_6 607 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g05659 951 Gene3D Transferase(Phosphotransferase) domain 1 702 919 - -
Seca12g05659 951 CDD STKc_IRAK 613 893 - -
Seca12g05659 951 Gene3D Ribonuclease Inhibitor 371 510 IPR032675 -
Seca12g05659 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
Seca12g05659 951 ProSiteProfiles Protein kinase domain profile. 607 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g05659 951 SUPERFAMILY L domain-like 397 504 - -
Seca12g05659 951 SUPERFAMILY Protein kinase-like (PK-like) 593 893 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05659 Seca-Chr12 148136428 148142166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05659 1 951 Receptor kinase-like Gene Family AT1G67720 67.539 0.0 1283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca12g05659 Malectin_like 9.5e-88 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05659 - - gmx:100790944 1562.74