Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05651 ATGAAACTCTCTTCAGCTGGTTTTAGTCCTCCACCCCAGGAAGGAGAAAAGCGAGTTCTAGATTCAGAACTTTGGCATGCTTGTGCTGGTCCTCTTGTTTCTTTACCAGCTGTTGGAAGCCGTGTGGTCTACTTTCCACAGGGTCACAGTGAACAGGTTGCTGCATCTACCAACAGGGAAGTGGATGCCCATATCCCCAACTATCCAAGCTTACCTCCCCAACTTATTTGTCAACTTCATAATGTGACTATGCATGCAGATACCGAGACAGATGAAGTATATGCACAGATGACCTTGCAACCTCTGAATCCTGTATGA 318 0.4623 MKLSSAGFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPSLPPQLICQLHNVTMHADTETDEVYAQMTLQPLNPV. 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05651 105 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 103 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05651 Seca-Chr12 147995666 147998077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05651 1 103 B3 DNA Binding Superfamily AT1G30330 89.524 1.96e-59 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05651 - - lja:Lj0g3v0288979.1 213.772