Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05588 ATGTCAGAGCTTTGGCTTAAACTGAAGAAATCACTTCCTTGCAAAACTCACTCTTCAGAAGTTCATGATCCAAAGGCAAGTAGGCACCAAAGAAAAAAGCAAGAAGATCATGTTAACTGTTCAAATATCAAAGAATTGATACATGATAGTATGAGGTGCTCAGAGAAACAACCAAGTACTCCAAAATCTCAAGCAAGCACTGCTATGCTTCTTAACCCTGTTACTCATGAAATTGTCCTTGATAGCACAAGTGGTGAGGTTAAAATGTGTCCATGCTTTCCTTATCCTCAAAATTATAGTGAAGATGACAAAGGCGTGGAAGGTTCTAATATTCATGGATCAATGAAGCGAACTATACCTACAATGGAAACACATTGTGTTGATTGTGATGAATGTAATATCTTCTCAAAACCAAAGGTGTTAGCGCAGAAAGATTCTAATGATCCTCCAACACTTGTTCGTCATCATCAATGTGGTCAGAAACAAAAAACTCTTGACACTATTGAAGAACTTGATATCTCTGAGCATTCTGTCATCCAGCTTCAAAAAGAAGATTCATCTTGGCAAATTATTGAAAAAATATGTGAAGCTAACCATATCAATTCTGAAAACAAGGCAACAAAGATTGAATGTGTCTTGAAAGTCCAGAACACACAAAAGATATATGCTTGCTTTGAGGAATGTCAAGAAATGGTAAAGACTAATGTTGAAAGGTTAAAACACAAGCACCCACGATGCTTGGTTGATGGAAATGAGCTATTGAGGTTTCATGGTGCATTTATTGAATGCTCCCTTGGTATACATGGCTCTTCTAGCCTGTGCACATTCGACCAATGTGGTGTATGTCAAATTTTGAGGCATGGTTTCTCAGCAAACCAAGAATTCCATGGTGCTTTTGGAATTAACACCAATTCTACTTGTGAAAAAGCCATTGATTCCATTGGTTCATCTAATAAACCAATCCTGAGAAAGTCTGTTATAGTGTGCAGAGTAATAGCTGGGAGAATCAATTATCCTCTACAAGAGATTCAAGGAATGACTAATTCAGGGTATGATTCTTTGGTGAGAAAAATAAGTGGCCAATCAAATATTGAAGAACTCCATGTTTTAAATCCTAGAGCTGTCCTTCCTTGCTTTGTGGTAATCTATAGACTCTGA 1158 0.3705 MSELWLKLKKSLPCKTHSSEVHDPKASRHQRKKQEDHVNCSNIKELIHDSMRCSEKQPSTPKSQASTAMLLNPVTHEIVLDSTSGEVKMCPCFPYPQNYSEDDKGVEGSNIHGSMKRTIPTMETHCVDCDECNIFSKPKVLAQKDSNDPPTLVRHHQCGQKQKTLDTIEELDISEHSVIQLQKEDSSWQIIEKICEANHINSENKATKIECVLKVQNTQKIYACFEECQEMVKTNVERLKHKHPRCLVDGNELLRFHGAFIECSLGIHGSSSLCTFDQCGVCQILRHGFSANQEFHGAFGINTNSTCEKAIDSIGSSNKPILRKSVIVCRVIAGRINYPLQEIQGMTNSGYDSLVRKISGQSNIEELHVLNPRAVLPCFVVIYRL. 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05588 385 Gene3D - 169 384 - -
Seca12g05588 385 MobiDBLite consensus disorder prediction 16 38 - -
Seca12g05588 385 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 383 - -
Seca12g05588 385 SUPERFAMILY ADP-ribosylation 178 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05588 Seca-Chr12 147050276 147054183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05588 4 89 C2H2 Transcription Factor Family AT5G54630 34.783 1.56e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05588 - - cam:105851073 453.366