Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05571 ATGCATGGAGTAACAGGCAGAGAGCAAACCTTCATAGCCTCAGTTGCTTCCCCAATGGTCCCAACTGATACCATTGCCAAATTTGCTTTGCCTGTAGATTCTGAGCACAAAGCCATGGTTTTTAAATTGTTCTCCATGGCCAATACGCATATGAGAACCTTCTACTTATCTTGGATATCCTTCTTCACTTGTTTTGTCTCAACCTTTGCAGCAACTCCTCTTGTCCCCATTATTCGTGACAACCTCAACCTCACTAAAAGTGACATTGGCAATGTTGGTCTTGCCTCTGTTTCTGGCAGTAGGCTTGTAAATGGGACATCAGCTGGTTGGGGTAACGTGGGTGGTGGAGTCACTCAGCTCATAATGCCATTGGTCTATGAATTGATCCGGCGAGCTGGGGCTACTCCCTTTACTGCATGGAGGATTGCCTTCTTCATCCCTGACTGGTTGCATGTCCTCATGGGCATCGTGTTATGGTATGCCATAACAAATTACAGGACATGGATTTTTGCCCTCTTTGAGCGCAAGCCTCAAGGCCTAAAGTTTTTGTTTTCTTACTAA 561 0.4545 MHGVTGREQTFIASVASPMVPTDTIAKFALPVDSEHKAMVFKLFSMANTHMRTFYLSWISFFTCFVSTFAATPLVPIIRDNLNLTKSDIGNVGLASVSGSRLVNGTSAGWGNVGGGVTQLIMPLVYELIRRAGATPFTAWRIAFFIPDWLHVLMGIVLWYAITNYRTWIFALFERKPQGLKFLFSY. 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05571 186 SUPERFAMILY MFS general substrate transporter 48 168 IPR036259 -
Seca12g05571 186 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 102 159 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05571 Seca-Chr12 146949014 146949926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05571 102 182 Inorganic Solute Cotransporters AT1G08090 50.450 1.15e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05571 K02575 - gmx:100782969 185.652