Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05530 ATGGAACAAACTGAAACTAACAATACTGTTGCGGTTGATCCCAAAAATTCTAAATCACCCAATAAAGATAATTTGGATTCTCATCAGATTCCTGAAGGTTACAAAAGGATAAGTGAACTAACAAATGAGGATATCAGAGGGCTTGAGTTTGATATAGAAGAAGTTGCATATGATTTCTACTGTGAGTATGCTAAATTCATAGGATTTTCTGTTAGGAAAGGTGATATCTATAGAAATTGTAATGGTTCAATTACAATGAGGCAATTGGTTTGTAATAGAGAGGGAGAGAAGTGA 294 0.3367 MEQTETNNTVAVDPKNSKSPNKDNLDSHQIPEGYKRISELTNEDIRGLEFDIEEVAYDFYCEYAKFIGFSVRKGDIYRNCNGSITMRQLVCNREGEK. 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05530 97 MobiDBLite consensus disorder prediction 1 26 - -
Seca12g05530 97 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 95 - -
Seca12g05530 97 MobiDBLite consensus disorder prediction 1 31 - -
Seca12g05530 97 Pfam FAR1 DNA-binding domain 58 96 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05530 Seca-Chr12 146485456 146485749 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g05530 FAR1 6.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05530 - K17604 ccaj:109792835 80.4925