Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05515 ATGGTTTGGTTAGTCAACGATCACTGCTTTTTGTCCTGTTTCTACCTCATCACTCCCACATCAAAACGAAACGAAAACGAAAACGAAAACGAAACCCATAATCTATCTCTATATATCTTGCACGTGCCTCTGGTTAGATGCAAGCACATCCTGAGTTCCAATCTCTTTCCAGTTAGAATGGCGGTGTTAGCGGAATCACTGCTTCCCTACAGACTGATGGAGCAACAACAACCCCTTTCTGTCTCTGTTGTTGCTTCTGCTGAAGCTTCTCCTTCAGAGGAACATTCCAATCCAACGGATGCAGTTATCTTCTTTGGTATCAGTATGGCTCTTGGAATTGCTTGTAGGCACCTCTTGCGTGGCACTAGAGTCCCTTATACTGTTGCCTTGCTCATCCTTGGCATTGCTCTTGGATCCATAGAATATGGTACTCGTCATCAGCTGGGAAAGATTGGGGATGGAATTCGTATTTGGAACGAGATTGATCCAGAACTTCTGTTAGCTGTTTTTCTTCCTGCTCTTCTTTTTGAGAGTTCATTCTCAATGGAAGTTCACCAAATTAAGAGGTGTATAGCACAAATGGTCTTACTAGCTGGTCCAGGTGTTGTGCTTTCGACCTTTTTACTTGGAACTGTTTTGAAGCTTACTTTTCCATATAACTGGGGTTGGAAAACATCACTGTTGCTTGGGGGACTTCTGAGTGCAACTGATCCTGTTGCTGTCGTGGCCTTGTTGAAAGAGCTTGGTGCCAGCAAAAAGCTAAGCACAATAATTGAAGGAGAATCCTTGATGAATGATGGGACGGCTATCGTGGTTTATACCCTTTTCTATCGGATGGTTCTCGGAGAGACCTTCAACTGGGCTGCCATAATCAAATTTCTAGCACAAGTTTCACTTGGAGCTGTAGGAATTGGTCTTGCTTTTGGCATAGCATCTGTTTTGTGGCTTGGGTTTATTTTTAATGATACAGTCATTGAGATTTCTCTAACACTTGCTGTTAGTTACATTGCGTACTTCACTGCTCAAGAGGGTGCAGATGTTTCTGGTGTTTTGACAGTGATGTCATTGGGAATGTTCTATTCTGCATTTGCAAAGACAGCTTTTAAGGGTGAAAGTCAACAGAGCTTACATCACTTTTGGGAAATGGTTGCTTATATTGCTAATACATTAATTTTCATTTTGAGTGGAGTTGTTATAGCTGAAGGAGTACTTGGTGATGACAATGTTTTTCATCATGGTAGTATTCACTTGAATCACTTCTTAAATCCTCTTCTTTGTTTGATATGCCATGGATTATATTCTTATGTTTTATTCACCTGGGCTAAACTGTACCATGAAATATATTGA 1347 0.4105 MVWLVNDHCFLSCFYLITPTSKRNENENENETHNLSLYILHVPLVRCKHILSSNLFPVRMAVLAESLLPYRLMEQQQPLSVSVVASAEASPSEEHSNPTDAVIFFGISMALGIACRHLLRGTRVPYTVALLILGIALGSIEYGTRHQLGKIGDGIRIWNEIDPELLLAVFLPALLFESSFSMEVHQIKRCIAQMVLLAGPGVVLSTFLLGTVLKLTFPYNWGWKTSLLLGGLLSATDPVAVVALLKELGASKKLSTIIEGESLMNDGTAIVVYTLFYRMVLGETFNWAAIIKFLAQVSLGAVGIGLAFGIASVLWLGFIFNDTVIEISLTLAVSYIAYFTAQEGADVSGVLTVMSLGMFYSAFAKTAFKGESQQSLHHFWEMVAYIANTLIFILSGVVIAEGVLGDDNVFHHGSIHLNHFLNPLLCLICHGLYSYVLFTWAKLYHEIY. 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05515 448 Gene3D - 223 274 - -
Seca12g05515 448 Pfam Sodium/hydrogen exchanger family 104 421 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca12g05515 448 PANTHER SODIUM/HYDROGEN EXCHANGER 88 422 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05515 Seca-Chr12 146193592 146201358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05515 98 443 Antiporters AT2G01980 72.253 1.02e-169 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05515 K14726 - gmx:100789429 562.377