Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05513 ATGCTTGTGAAGTACCGTGAGGAATTAACGAGGCCTATACAAAAGGCGATGGATTTCATGCGGAGGACAGAAACTCAACTCATCATGTTTTGCAATGGACCCTTGCGGATCTTCTTTGGTATAATCTTTCTTTCTCTTTTTATCAGTGGAGGAGGACCTTCAATGTCTATAATAGAAAATTGTCATTGA 189 0.3968 MLVKYREELTRPIQKAMDFMRRTETQLIMFCNGPLRIFFGIIFLSLFISGGGPSMSIIENCH. 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05513 62 SMART KNOX2_2 1 32 IPR005541 GO:0003677|GO:0005634
Seca12g05513 62 Pfam KNOX2 domain 1 31 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05513 Seca-Chr12 146136845 146137033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05513 1 38 Homeobox Transcription Factor Family AT4G08150 68.421 3.09e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05513 - - gmx:100800822 66.6254