Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05510 ATGGCAATGGACGCGCATCTCCGTCTTCCTTCATCAGACGACGTCGTTCTCAACGTCGACTCTTCTGCTCACAATGTCACCGTGAAGGAGAAAAGAGACACTTTGCTTCTTGCATATAGGACACTGGGTGTGGTATTTGGAGGTCTTGTGACGTCACCCCTTTATGTGTACCCTTCAATGCCACTCAAATCTCCAACAGAAGAAGACTATTTGGGTATTTACAGCATCATGTTTTGGACTCTTACTCTTATTGGGGTTGTCAAATATGCCAACATTGCCCTCAAAGCTGATGACCACGGTGAAGGTGGGACTTTTGCCCTGTATTCATTACTTTGCAGGCATTTCAATATTGGAATCTTGCCTTCTAAACAGCATCTCGGTTTAAACTCAACTAGGACCACTCAAACACACACCTGGCTTGCCAAATTGTTTGAAAAAAGCTTGGTTGCTCGAAGGATCTTGCTTTTTGTTGCCATGTTGGGTACTTGTATGCTTATTGGTGATGGTATACTTACCCCTGCAATTTCAGTGTTGTCAGCAATGGATGGAGTCAGAGCACCTTTTCCTTCAGTTAGCAAATCACTAGTAGAAGCACTCTCTGCAGTTATCTTGATCTTTCTGTTCTTGTTGCAAAAATTTGGTACATCCCGCGTCAGTTTTCTCTTTTCCCCAATAATGGGCGCGTGGACCCTGTGTACTCCACTTGTTGGAATTTACAGCATCATACACCACTATCCAAGTATATTCAAGGCTTTATCCCCACACTACATTTTCCGTTTCTTTTGGAGAAATGGGAAATCCGGGTGGCTTTTACTTGGTGGTACTGTCCTTTGCATTACAGGTATGTATCTTTCCCTTTTTGCATGTTCTGAGGCGATGTTTGCTGATCTTGGTCATTTCAATCCACGATCCATTCAGCTAGCTTTCCTATTCACAATCTACCCATCTTTAGTTCTGACTTATGCGGGACAAACAGCATACTTGATCAAGAATCCCAATGATCATGATGATGGCTTTTATAAATTTATACCCACAGCAGTCTACTGGCCTATCTTTGTTATTGCAACATTGGCCGCAATTGTTGCTAGCCAGTCATTAATATCGGCCACTTTTTCTGTTATCAAGCAATCTGTAGTGCTAGATTATTTTCCTCGAGTAAAGATTGTACACACATCTCATAATAAAGAAGGAGAGGTTTACTCCCCTGAAGTGAACTACATTCTGATGGTCCTCTGTGTTGCTGTCATACTTATTTTTGGAGATGGAAAAGATATTGGAAATGCTTTTGGTGTTGTTGTGAGCCTAGTGATGCTCATCACCACTATACTACTTACACTAGTCATGATCATGATATGGAGAACTCCTGTCGCGCTGGTTGCCCTGTACTTCTTGGTGTTTTTTGTGATGGAAGGGGTTTATGTCAGTGCAGTTTTCACTAAATTTGCTGAAGGTGGATGGATTCCTTTTGCCATATCACTTATCCTTGCCTTCATCATGTTTGGTTGGTTTTATGGCAGACAAAGAAAGGTAGATTATGAGGTAACCCACAAGATAACCTTTGAGAGACTCCAAGAGCTTTTAGCTGACTGCAGTGTTCAAAGGGTTCCTGGATTATGCTTCTTTTATACTAACATTCAAGATGGATTGACTCCTATTCTTGGACACTACATAAAGAACATGAAATCCCTTCATAAGGTCACAATATTCACAACTCTTAGATATTTGTTAGTCCCCAAGGTTTCTCCCAATGAGAGGTTTGTCATAAGGAAATCAAATCTCAAAGGGATATATTGTTGTGTGATTCAGTATGGCTATGCAGATGCTCTAAATTTAGAAGGAGATGATTTTGTAAATCAAGTTATTAATAGTTTGACAACACATATACAGAAGTTCCCTGATAACCTTTCATCTGAATCTCAAGAGATTGGAGAAGAGGTTTCCAGTTTAAAAGAAGCACGTTGTGCTGGGGTTGTTCATGTCCGTGGAAAGACAAGATTTTACATTGGCCTCAACTGTGGCTGGTTTGATAAAATCATGCTTAGTTTTTATGAAGTCATGCATAGTAACTGTAGATCTGGCCTTCCTGCTTTAGGGGTTTCATTACAGCAAAGGATTGAAGTTGGAATGCTCTATGAGGCTTGA 2142 0.4076 MAMDAHLRLPSSDDVVLNVDSSAHNVTVKEKRDTLLLAYRTLGVVFGGLVTSPLYVYPSMPLKSPTEEDYLGIYSIMFWTLTLIGVVKYANIALKADDHGEGGTFALYSLLCRHFNIGILPSKQHLGLNSTRTTQTHTWLAKLFEKSLVARRILLFVAMLGTCMLIGDGILTPAISVLSAMDGVRAPFPSVSKSLVEALSAVILIFLFLLQKFGTSRVSFLFSPIMGAWTLCTPLVGIYSIIHHYPSIFKALSPHYIFRFFWRNGKSGWLLLGGTVLCITGMYLSLFACSEAMFADLGHFNPRSIQLAFLFTIYPSLVLTYAGQTAYLIKNPNDHDDGFYKFIPTAVYWPIFVIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKIVHTSHNKEGEVYSPEVNYILMVLCVAVILIFGDGKDIGNAFGVVVSLVMLITTILLTLVMIMIWRTPVALVALYFLVFFVMEGVYVSAVFTKFAEGGWIPFAISLILAFIMFGWFYGRQRKVDYEVTHKITFERLQELLADCSVQRVPGLCFFYTNIQDGLTPILGHYIKNMKSLHKVTIFTTLRYLLVPKVSPNERFVIRKSNLKGIYCCVIQYGYADALNLEGDDFVNQVINSLTTHIQKFPDNLSSESQEIGEEVSSLKEARCAGVVHVRGKTRFYIGLNCGWFDKIMLSFYEVMHSNCRSGLPALGVSLQQRIEVGMLYEA. 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05510 713 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 29 712 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g05510 713 NCBIfam potassium uptake protein 37 712 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g05510 713 Pfam K+ potassium transporter 39 607 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05510 Seca-Chr12 146061837 146066352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05510 32 712 Inorganic Solute Cotransporters AT4G13420 38.223 9.89e-173 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05510 K03549 - gmx:100783944 1198.34