Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05477 ATGGAGATCCCTTCTTCCTTCTTGTCCTACTCTCTTCTCTACCTTGCTCTTTTCCTTGTCTTCAGGCTTCTCTTCCAAACAAGAAAATTCAAAAACCTCCCACCAGGTCCACCTTCTCTTCCCATTCTCGGCAACCTCCACCACCTCAAACGCCCACTCCACCGCACTTTCAAATCCCTCTCACAAACCTACGGCCCTGTCTTCTCCCTCTGGTTCGGTTCACGTCTTGTAACCGTTATCTCTTCTCCCTCCATCTTCCAAGAATGCTTCACCAAAAACGACATCGTTCTCGCAAACAGGCCACGCTTCCTTTCCGGAAAATACATCTTCTACAACTACACCACTTTAGGTTCTTCCTCCTACGGTGAACACTGGCGTAACCTTCGTCGTATCACTGCCCTCGATGTCCTCTCAACTCACCGCATCAACAGCTTCTCTGGAATCCGAAGGGATGAGACACAGAGGCTCATAACAAAGCTTGCTGAGGACGCTTCTCTTGACTTCGCGGAAGTTGAGTTGACTTCTAGATTCTACGACATGACGTTTAACAACATCATGAGAATGATCTCTGGCAAGAGATTCTATGGGGATGATTGTGACATGACCGATGTGGAAGAAGCCAAGCAGTTTAGAGCCATGGTTTCAGAGTTGTTGCAGTTATCAGGTGCAAATAACAAGAATGACTTCATGCCTATACTTAGGTTGGTTGATTTTGAAAACTTGGAGAAGAGGCTAAAGAAGATTAGTAACAAAACGGATACCTTCTTGAAAGGACTCCTTCAAGAACATCGCAACAAGAAGCAAAATGCAAATACCATGGTAGATCATCTCCTAAGTCTCCAAGAATCACAGCCTGAGTACTATACTGATCAAATCATCAAAGGCCTTGCTTTGGGCATGCTTTTGGCTGGAACGGACTCATCAGCTGTAACTTTAGAGTGGGCAGTATCTTGTTTACTGAACCATCCTGAGGTGTTGAAGAAGGCTAGAGATGAGTTGGATACTCATGTTGGTAAAGACCGTTTATTGGATGAGTCTGACCTTTCAAAACTTCCTTATCTTAAAAATATTATCTATGAGACACTTCGATTGTATACTCCGGCTCCGTTATTATTACCACACTCTTCTTCTGATGAGTGTATTATTGGAGGATTTAGAGTCCCACGAGACACTATAGTGTTGATTAATGCTTGGGCTATTCATAGAGATCCTCAGATATGGAGTGAAGCTACGAGTTTCAAACCTGAGAGGTTTGAGAAAGAAGGTGAGCTGGACAAGTTAATTGCGTTTGGGTTGGGGAGAAGAGCTTGTCCTGGAGAAGGCTTAGCCATGCGTGCAATCAGCTTGACTTTGGGGTTGTTGATTCAATGCTTTGAATGGAAACGAGTAGGTGATAAAGAGGTTGATATGAGAGAGGAAAGTGGATTCACCTTATCTAGGTTAATCCCATTAAAGGCTATGTGTAAAGCTCGTCCAGTCATCAACAAGCTTGTGAAGTAA 1500 0.4387 MEIPSSFLSYSLLYLALFLVFRLLFQTRKFKNLPPGPPSLPILGNLHHLKRPLHRTFKSLSQTYGPVFSLWFGSRLVTVISSPSIFQECFTKNDIVLANRPRFLSGKYIFYNYTTLGSSSYGEHWRNLRRITALDVLSTHRINSFSGIRRDETQRLITKLAEDASLDFAEVELTSRFYDMTFNNIMRMISGKRFYGDDCDMTDVEEAKQFRAMVSELLQLSGANNKNDFMPILRLVDFENLEKRLKKISNKTDTFLKGLLQEHRNKKQNANTMVDHLLSLQESQPEYYTDQIIKGLALGMLLAGTDSSAVTLEWAVSCLLNHPEVLKKARDELDTHVGKDRLLDESDLSKLPYLKNIIYETLRLYTPAPLLLPHSSSDECIIGGFRVPRDTIVLINAWAIHRDPQIWSEATSFKPERFEKEGELDKLIAFGLGRRACPGEGLAMRAISLTLGLLIQCFEWKRVGDKEVDMREESGFTLSRLIPLKAMCKARPVINKLVK. 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05477 499 FunFam Cytochrome P450 family protein 25 494 - -
Seca12g05477 499 Pfam Cytochrome P450 34 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 PANTHER CYTOCHROME P450 82C3-RELATED 15 491 - -
Seca12g05477 499 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Seca12g05477 499 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 SUPERFAMILY Cytochrome P450 34 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05477 499 CDD CYP81 65 484 - -
Seca12g05477 499 Gene3D Cytochrome P450 22 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05477 Seca-Chr12 145618280 145619875 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05477 11 497 Cytochrome P450 AT4G37370 55.984 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05477 K13260 - gmx:100784650 849.736