Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05470 ATGGCCCCTTTGCTGTATTACTCCCTCCTTTCTCTCGCTTTTATTCTTACCTTTAAGCTTTTGCTACAAAAAAGAAGATTCAAGAACCTTCCACCATCTCCACCATCTCTTCCCATAATAGGAAACCTTTACCAGCTAAAACCCCCACTCCACCGCTCCCTTCACACCCTTTCACAAAAGTACGGCCATATCTTCTCTCTCCGGTTCGGTTCACGTCTCGCGGTCGCTATCTCCTCACCAGCGTTAGCTCATGAATGCTTCACCAAATACGACACCGTTTTGGCGAACCGGCCACGTGCCCTCACTGGAAAGCACCTCTTCTACAACTACACCAGCTTGGATTCCGCTCCCTATGGCGACCACTGGCGCAACCTCCGCCGAATTATCACAATCGATGTCCTCTCAACGCAGCGTCTCAACTCTTTCATCGAAACACGAAGGGACGAGAGCAGGAGGTTCATACGAAAGCTGGCTCAGGACACGTGCGAGGGGTTCACACGTGTGGAGCTCAGAAGCAGGCTCACGGAGATGATTTTCAACAATATGATGAGAATGATCTCAGGGAAGGAGGTGGAGGAAACGGAGGAGTTCAGAGAGGTGATGGCGGAGATGTTGCCGTTGTTCGATGCAAGCAATAAGGCAGATTTCTTGCCTATGCTTCAGTGGTTTGATTTTGATGGTTTGGTGAAGAGGATGAAGAAGATTAGCAAGAGAGCTGATGCGTTCTTGCAAGGAATCGTTGAAGAGCATCGTAGTGGGAAGGACAGTGCTAATACTATGATACATCATCTCTTGACTATGCAAGAATCTCAGCCTGAGTATTACTCCGATCATATTATCAAAGGCCTTATTCAGGGTATGTTCCTTGGTGGAACAGATACAACAGCGGGGACAATAGAGTGGGCAATGTCTGTTTTGTTAAATCACCCAAAGATATTGAAAAGGGCAAAAGATGAATTAGACACTCACGTGGGACAAGATCGCTTGGTAGATGAATCGGACATTCCAAACCTTCCTTATCTCCAAAATATTATCCATGAGACACTTCGATTGTATTCTCCAGCTCCATTACTATTACCTCATTTTTCTTCAGATGAGTGCAATATCGGAGGATTCACTATTCCACGTGATACTATTGTGTTCATTAATGCCTGGGCCATTCATAGAGATCCTGGAATTTGGACGGATGCTTTATGTTTTAAGCCCGAGAGATTTGAAAAAGAAGGGGAAACAAACAAGTTAATTTCATTCGGATTGGGAAGAAGGGCTTGTCCAGGATTAGGTTTAGCACATCGCACAATAGGCATGACTTTGGGATTATTGATTCAGTGCTTTGAATGGAAACAACTAACTGACGCAGAAATTGATATGAGGGAGAATAAAGGCGTTGTCATGACAAAGCTGATTCCACTAGAAGCTATGTGTAAAGCACTGCCAATCAACAAGAAAGTTATGTAA 1458 0.4479 MAPLLYYSLLSLAFILTFKLLLQKRRFKNLPPSPPSLPIIGNLYQLKPPLHRSLHTLSQKYGHIFSLRFGSRLAVAISSPALAHECFTKYDTVLANRPRALTGKHLFYNYTSLDSAPYGDHWRNLRRIITIDVLSTQRLNSFIETRRDESRRFIRKLAQDTCEGFTRVELRSRLTEMIFNNMMRMISGKEVEETEEFREVMAEMLPLFDASNKADFLPMLQWFDFDGLVKRMKKISKRADAFLQGIVEEHRSGKDSANTMIHHLLTMQESQPEYYSDHIIKGLIQGMFLGGTDTTAGTIEWAMSVLLNHPKILKRAKDELDTHVGQDRLVDESDIPNLPYLQNIIHETLRLYSPAPLLLPHFSSDECNIGGFTIPRDTIVFINAWAIHRDPGIWTDALCFKPERFEKEGETNKLISFGLGRRACPGLGLAHRTIGMTLGLLIQCFEWKQLTDAEIDMRENKGVVMTKLIPLEAMCKALPINKKVM. 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05470 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Seca12g05470 485 Gene3D Cytochrome P450 19 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 CDD CYP81 62 471 - -
Seca12g05470 485 Pfam Cytochrome P450 31 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 SUPERFAMILY Cytochrome P450 31 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g05470 485 PANTHER CYTOCHROME P450 82C3-RELATED 14 476 - -
Seca12g05470 485 FunFam Cytochrome P450 family protein 21 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05470 Seca-Chr12 145404797 145407766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05470 5 485 Cytochrome P450 AT4G37340 52.632 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05470 K13260 K22932 gmx:100784120 715.687