Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05447 ATGCCATGGAGTGATGATGATGAATCAGCAGATGAGTCATCGTGTTTCCATCCTGACTCTGAACATGATACTGAAACTGATGGGAAAGATTCCAAAGATTTGTTGAAATGCAAGGCTGAAAATGTGTGCAGTCCAACACTTTCATTGAAGGAATTTCTCACAAGATCACGAAGTCGTGGTGATAATCAATTGTCATTTCACAGTACTGGTGTCAATTTCTCTACATATTCAGATTTTGCGGGGAAGGAATTGATTTGCAGGGCTGACTCAAGTTTTGAAATTTGGGGAACTAGGGGTTGCATTTTGAAGGGTTTTGAATATGAAATCTACAAGATCATTGAATGCATTGAATCTCTATTTAATGGTTTCTCCGGCGAGGTTCCTGAAGAACCCCTGGTGTCCAAGAACTCTGGTCTCCTCTTTGAGAAGCGTTTATTCGAGAGACATATCGGTGGAAAAGCTAAGCCTTTGAAGAAACCCAAGTCTGATAAGAAGAAATACGATGAGGACGATGAGGTATTTTGTTAA 528 0.4015 MPWSDDDESADESSCFHPDSEHDTETDGKDSKDLLKCKAENVCSPTLSLKEFLTRSRSRGDNQLSFHSTGVNFSTYSDFAGKELICRADSSFEIWGTRGCILKGFEYEIYKIIECIESLFNGFSGEVPEEPLVSKNSGLLFEKRLFERHIGGKAKPLKKPKSDKKKYDEDDEVFC. 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05447 175 MobiDBLite consensus disorder prediction 10 30 - -
Seca12g05447 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 170 IPR013083 -
Seca12g05447 175 Pfam Translation machinery associated TMA7 151 174 IPR015157 -
Seca12g05447 175 MobiDBLite consensus disorder prediction 152 175 - -
Seca12g05447 175 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05447 Seca-Chr12 145174389 145179425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05447 12 99 Subtilisin-like Serine Gene Family AT5G19660 40.000 6.57e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05447 K08653 - dcr:108196558 66.6254