Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05433 ATGAAGAAGAAGAAGATGGTGAAGGGACGCCAAGGAGAGCGCGTCAGATCCAAATCAAACCAATACCCAAACACATCTCTGGTCCAAATTGAGGGAGTAAACACTACAGAAGAGGTGTCATGGTACGCTGGCAAGCGGATGACATATATCTACAAGGCCAAGGTGAAGAAGAATGGAACCCATTACCGCTGCATATGGGGTAAGGTTACAAGGCCTCACAGAAACAGTGGTGTTGTTTGTGCAAAATTCAAGTCAAATCTTCCTCCCAAATCAATGGGAGCACGGGTAAGGGTGTTTATGTATCCAAGTAACATATGA 318 0.4497 MKKKKMVKGRQGERVRSKSNQYPNTSLVQIEGVNTTEEVSWYAGKRMTYIYKAKVKKNGTHYRCIWGKVTRPHRNSGVVCAKFKSNLPPKSMGARVRVFMYPSNI. 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05433 105 MobiDBLite consensus disorder prediction 1 21 - -
Seca12g05433 105 PANTHER 60S RIBOSOMAL PROTEIN L35A 7 105 IPR001780 GO:0003735|GO:0005840|GO:0006412
Seca12g05433 105 FunFam 60S ribosomal protein L35a 1 105 - -
Seca12g05433 105 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 7 99 IPR001780 GO:0003735|GO:0005840|GO:0006412
Seca12g05433 105 Gene3D translation elongation factor selb, chain A, domain 4 2 105 IPR038661 -
Seca12g05433 105 SUPERFAMILY Translation proteins 13 99 IPR009000 -
Seca12g05433 105 Pfam Ribosomal protein L35Ae 15 99 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05433 Seca-Chr12 145003888 145007872 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05433 6 105 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 81.250 1.91e-61 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05433 K02917 - jre:108991889 188.348