Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05424 ATGGCTTCAAGAGTAGAGACCGATGAAGAGGGTGATAACAAAGGTAGTATGTGGGATTTGGATCAGAAACTTGACCAGCCTATGGATGAAGAGGCAGGAAGGCTCAAAAATATGTACAGAGAAAAAAAATTTTCTGCACTGTTGCTTCTGCGGCTTGCATATCAGAGTCTTGGTGTAGTTTATGGAGATTTGGGCACTTCACCCTTGTACGTATTCTACAATACGTTTCCTAATGGTGTAGAAGATCAGGAGGATGTAATTGGAGCTCTTTCTTTGATTATCTATTCTCTTACTTTGGTGCCGCTCCTCAAATATGTTTTTATTGTGTTGAGAGCAAATGATAACGGCCAAGGTGGAACATTTGCGCTTTATTCCTTGCTCTGCCGACATGCAAAGATAAAAACCATTCCCAACCAGCATCGCACTGATGAAGAGCTAACAACATATAGTCGGTCTACCTTCGATGAAAGGTCATTTGCTGCAAAAACCAAAAGATGGTTAGAGAATCGTGAATCTAGGAAGAGTGCCATTCTTATTCTTGTCCTTGTTGGCACCTGCATGGTGATTGGAGATGGGATTCTTACCCCAGCTATATCTGTTATTTTCAAGAGATTCTTAACCATATCTTCTGTTGTAGTTTTATCAGCTGTTGGTGGCATCAAGGTTAATCAACCCAGCATGAGTAGTGGTCTTGAAAAGTTTCTTTCTGTTTGGGCTACAGGTGTAGTAGTGCTGGTTGCTGTTGTAATATTAGTTGGGCTTTTCAGCATGCAACATTATGGCACAGATAAAGTTAGTTGGCTCTTTGCTCCAATTGTCCTTCTTTGGTTTCTCCTAATTGGAGGCATTGGTGTATATAACATCTGGAAGTATGGAAGCAGTGTTCTAAGGGCTTTTTCTCCTGTGTATATTTATCGCTATTTCAAAAGAGGAGGAAAAGATGGATGGACTTCCCTTGGTGGTATCATGCTCAGCATAACAGGGACAGAGGCTCTTTTCGCTGACCTAGCTCATTTTCCAGTCTCATCGGTACAGCTTGCATTTACTGTAGTTGTGTTTCCTTGCCTTCTTTTAGCCTATTCTGGACAAGCTGCTTACCTTATGAATAACTTGAGTCATTCACAAGATGCTTTTTATCGTTCTATTCCAGATAGAATATACTGGCCAGTATTTGTTGTTGCAACAGCAGCAGCCATAGTTGCAAGCCAGGCCACAATAACTGCAACTTTTTCGATTATTAAGCAAGCCCTTGCTCATGGATGTTTCCCTAGAGTTAAAGTTGTATATACATCAAAGAATTTCCTTGGCCAGATATATATTCCAGATATCAATTGGGTCCTTATGATTCTTTGCATTGCCGTTACTGCTGGATTCGAAAATCAAAACCAGATTGGAAATGCATATGGTACTGCAGTTGTGATAGTCATGCTGGTTACAACATTCCTTATGATTTTAATCATGATATTAGTGTGGCGCTGCCATTGGATTCTTGTCTTTATCTTCACTTGCTTATCATTGATTGTGGAATGCACATACTTCTTCTCAGTACTCTTCAAAGTTGATCAAGGTGGGTGGGTTCCCCTTGCAATAGCTGGAGCATTTCTTGTTATCATGTTTGTCTGGCATTACGGTACACTGAAACGCTACGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTTGGACTTGGCCCGAGTTTAGGACTTGTTCGTGTCCCTGGAATTGGACTAGTCTACACAGAACTTGCAAGTGGAGTACCCCACATCTTTTCTCATTTCATCACCAACCTACCAGCCATTCATTCTGTTGTGGTTTTTGTATGTGTCAAATACCTTCCTGTCTACACAGTCCCAGAAGATGAGAGATTCCTTGTCAAGAGGATTGGACCTAAGAATTTTCACATCTTTCGATGTGTGGCGCGATATGGCTATAAAGACCTGCATAAGAAAGATGATGAGTTTGAGAAGAAACTCTTTGATAATCTTTTCATGTTTGTTCGGCTCGAGTCTATGATGGAAGGATTTTCAGATTCAGATGAATACAGTTTATATGGACAGCAAACACATCAATCAAGAGATGGCCTATTGAATAACAATGGAAATACAACTTCTTCCAATATGGATTTAACAATTTCCTCAGTAGATTCAATAGAACCAGTTAGATCACCAGCACATGTGAATATTACTACTGTCAGGTCCTGTGGTCAAGTAAGCAGCCACACAGAGGTTGATGAACTTGAATTTTTGAATAATTGCAGGGATGCTGGGGTTGTTCACATACTAGGAAACACAATTGTGAGGGCAAGGAGGGATTCAAGGTTCTATAAGAAAATAGCTGTTGATTATATATATGCATTTCTTAGGAAGATATGCAGGGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAACGTTGGTCAGATTTTCTCTGTATAG 2451 0.4011 MASRVETDEEGDNKGSMWDLDQKLDQPMDEEAGRLKNMYREKKFSALLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPNGVEDQEDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFDERSFAAKTKRWLENRESRKSAILILVLVGTCMVIGDGILTPAISVIFKRFLTISSVVVLSAVGGIKVNQPSMSSGLEKFLSVWATGVVVLVAVVILVGLFSMQHYGTDKVSWLFAPIVLLWFLLIGGIGVYNIWKYGSSVLRAFSPVYIYRYFKRGGKDGWTSLGGIMLSITGTEALFADLAHFPVSSVQLAFTVVVFPCLLLAYSGQAAYLMNNLSHSQDAFYRSIPDRIYWPVFVVATAAAIVASQATITATFSIIKQALAHGCFPRVKVVYTSKNFLGQIYIPDINWVLMILCIAVTAGFENQNQIGNAYGTAVVIVMLVTTFLMILIMILVWRCHWILVFIFTCLSLIVECTYFFSVLFKVDQGGWVPLAIAGAFLVIMFVWHYGTLKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEDERFLVKRIGPKNFHIFRCVARYGYKDLHKKDDEFEKKLFDNLFMFVRLESMMEGFSDSDEYSLYGQQTHQSRDGLLNNNGNTTSSNMDLTISSVDSIEPVRSPAHVNITTVRSCGQVSSHTEVDELEFLNNCRDAGVVHILGNTIVRARRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFSV. 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05424 816 MobiDBLite consensus disorder prediction 1 20 - -
Seca12g05424 816 Pfam K+ potassium transporter 54 648 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g05424 816 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 41 813 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g05424 816 NCBIfam potassium uptake protein 52 814 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05424 Seca-Chr12 144913763 144920903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05424 1 816 Inorganic Solute Cotransporters AT1G31120 76.428 0.0 1231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05424 K03549 - gmx:100794454 1387.47