Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05384 ATGTTTTCTCCATGTGGAAGATCATGTTGTTATGGGGATCCTTCTCTCCGATTGTTGACAAGGACAATTGTAGATGATGAGTACCCTTTAGAAGGTGTCAACTGTGATCAACTTGTAGAGGATCACAAGAGATCGGAGATCGATGAACTCAACAAAAAACATGATGCACTTCAAGATCAATTGTATGTTGAGAAAGCACATGAGAAAAAACTAAATAACATATTGAAGCAAAGGAAAAACGATGGCTGGTGGGAGGCCAAAGTGCAAGCTCTTAGTTGTGAACATGCTGAGGAAATGGAAGCAAGTCTTTTAGAATTACATGAAAAATTGTCAAATGAACATTCAATCAAGTGTGGAGGAAATGCTTCTCATGGTATGGTCTCTTCAATTTAA 393 0.3791 MFSPCGRSCCYGDPSLRLLTRTIVDDEYPLEGVNCDQLVEDHKRSEIDELNKKHDALQDQLYVEKAHEKKLNNILKQRKNDGWWEAKVQALSCEHAEEMEASLLELHEKLSNEHSIKCGGNASHGMVSSI. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05384 130 Coils Coil 93 113 - -
Seca12g05384 130 Coils Coil 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05384 Seca-Chr12 144096304 144096696 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05384 1 129 Type I MADS-box Gene Family AT5G60440 27.481 5.24e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05384 - K12412 gmx:102665718 107.842