Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05367 ATGATGACAAGGTCTTTTGTTGGGAAGATACAAAAGAGTCTCTCACTCTTTGTACCAACAAGGACTGCACTACACTTGAATGAAGATCAACAGGAAATTGCAACCTCAATTCCAGATGATGTTTTGGAAGGACATTTTGTTGTTCTTGCTACCAATGGTGAGGAAAGCAAAAGGTTTGTTGTTAAGTTAGATTACTTGAGTGACCCTGCATTCTTGAGACTGTTGGACCAAGCTAGGGAGGAGTTTGGTTTCAGGCAGAAGGGAGCTCTTGCAGTCCCTTTCCGGCCTCAAGAATTACAAAAGATTCTACATGATCCAAGAGCATAG 327 0.419 MMTRSFVGKIQKSLSLFVPTRTALHLNEDQQEIATSIPDDVLEGHFVVLATNGEESKRFVVKLDYLSDPAFLRLLDQAREEFGFRQKGALAVPFRPQELQKILHDPRA. 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05367 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 102 IPR003676 GO:0009733
Seca12g05367 108 Pfam Auxin responsive protein 32 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05367 Seca-Chr12 143756771 143757097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05367 7 94 Calmodulin-binding Proteins AT4G34750 37.363 3.77e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05367 - K14488 gmx:100797479 132.494