Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g05302 | ATGGTTTGGAGATTTTTAATTACCTTTGCTGATATTCTGGAATTATGGTCTTTTACTCTTGATGAGTTTGTGCAAGCATTTCACGACTATGTAAGAACTTTTGGCCAGGTCTTGGAATGTTTTGACAATGAAAAGAACATGAGCGGGATATTTTCATTACTGCTTGCCTATATGGAAGCTTGTCCTTCTGGCAATTTTGGTCTCTGA | 207 | 0.372 | MVWRFLITFADILELWSFTLDEFVQAFHDYVRTFGQVLECFDNEKNMSGIFSLLLAYMEACPSGNFGL. | 69 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g05302 | 68 | PANTHER | HOMEOBOX-DDT DOMAIN PROTEIN RLT2 | 1 | 30 | IPR044977 | GO:0006357 | |
Seca12g05302 | 68 | Pfam | DDT domain | 1 | 29 | IPR018501 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g05302 | Seca-Chr12 | 142731775 | 142732683 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g05302 | 1 | 37 | Homeobox Transcription Factor Family | AT1G28420 | 68.421 | 4.37e-15 | 65.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | DDT | Seca12g05302 | DDT | 2.9e-07 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g05302 | - | - | psom:113316999 | 66.2402 |