Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05296 ATGGCGTCGTCGAAGGTTGTCTCGACGAATCCGGATCTGCCACGCGATTCCTCTTCTATATCTTCTTCTTCTTCCTCTTCCCTTTCTTCCCTTCTTGATCTCCACCCTTCAACCACCATGGATGACCTCCTCAAGTCCATCTACACTCCTTCCCCTAAAGACACCAAACCCACCTCCCTCGATGATATCTGGAAGGACCTCATCGTCGGCGCTAACAGACCTCCCGCCGATGTTGCTCCCGTCGCCAGTGAGGGAATGACCCTTGAGACTTTCTTAGCCAAAAACGGTATCGTTAGAGAAGAGGACGTTACAGGGGTCCTTCCTCCTCCTCCTCCTCCTCCTCATTCTTCTTCTTCTTCCCTTACCCCTCATTTCCCTCTCCCTCCCCCTCCTTCTTCCGATGTTTCTTCCTCTTCTCTCGCACCAAATGGGATTGCTGCAACATCAACGCCGTCACCGTCGGTAGCTAAGGGAAAGAGAAGGGCTCTTGAGGAACCTGTTGATAAGGCCACTCTTCAGAAACAGAGAAGAATGATCAAGAATAGAGAGTCCGCCGCCAGGTCCAGGGAACGCAAGCAGGCTTACACATCTGAGCTTGAGTATTTGGTTCAGCAGTTGGAGGAAGAGAATGCGCGATTATTGGATGAAGAGGCTGAGATGAAAAAGCAGAGACTTAAGCAGCTCAGAGAGTGCCTCATTCCAATAGTGGAGAGGCCTAAACCAAAAAGGAGGCTTAGGAGATCAAATTCAGCCCAAACATTGTGA 765 0.5046 MASSKVVSTNPDLPRDSSSISSSSSSSLSSLLDLHPSTTMDDLLKSIYTPSPKDTKPTSLDDIWKDLIVGANRPPADVAPVASEGMTLETFLAKNGIVREEDVTGVLPPPPPPPHSSSSSLTPHFPLPPPPSSDVSSSSLAPNGIAATSTPSPSVAKGKRRALEEPVDKATLQKQRRMIKNRESAARSRERKQAYTSELEYLVQQLEEENARLLDEEAEMKKQRLKQLRECLIPIVERPKPKRRLRRSNSAQTL. 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05296 254 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 229 IPR043452 GO:0003700|GO:0045893
Seca12g05296 254 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 172 228 - -
Seca12g05296 254 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 176 191 IPR004827 GO:0003700|GO:0006355
Seca12g05296 254 Gene3D - 172 230 - -
Seca12g05296 254 CDD bZIP_plant_BZIP46 173 222 - -
Seca12g05296 254 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 223 IPR004827 GO:0003700|GO:0006355
Seca12g05296 254 MobiDBLite consensus disorder prediction 1 34 - -
Seca12g05296 254 Pfam bZIP transcription factor 170 225 IPR004827 GO:0003700|GO:0006355
Seca12g05296 254 MobiDBLite consensus disorder prediction 136 155 - -
Seca12g05296 254 MobiDBLite consensus disorder prediction 105 135 - -
Seca12g05296 254 SMART brlzneu 169 233 IPR004827 GO:0003700|GO:0006355
Seca12g05296 254 MobiDBLite consensus disorder prediction 158 191 - -
Seca12g05296 254 Coils Coil 192 231 - -
Seca12g05296 254 MobiDBLite consensus disorder prediction 102 191 - -
Seca12g05296 254 SUPERFAMILY Leucine zipper domain 173 224 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05296 Seca-Chr12 142635045 142638595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05296 59 250 bZIP Transcription Factor Family AT5G44080 42.079 7.86e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca12g05296 bZIP_1 9.5e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05296 K14432 - gmx:100101890 223.787