Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05289 ATGGCTGTTTCTCTTAGACTGGAGAAGCCAAATCTTGGAACACATGCTGGGAAGGCCAAGTTGCTGGGCACTATAACAGCAATTGGTGGTGCCATGATCCTCACTTTATATGAAGGGAGAAGGATATTCAACTGGTCAATACACGTTGACTTATTTCAACATGCAGCACCATCACCAGAGAGTGCCACCTCTGGTTCTCGCTTGTGGGGCTTCATGCTAGCTCTGGTCACTCCTGTGAGTTACTCATTGTGGTTGATAATCCAGACAAAGATGAGTGAGAAGTTTCCGTGGCACTATTCAATTGCGGCTTTAACCTCTATCATGGGCGCAATCCAATCTATTATATTTGCTCTTTGTACGGAAAGAGATTGGAGCCAATGGAAACTTGACTGGAACTTGAGGCTTTTAGTAGCAGCTTCCTCGGGTATCTTGGTCTCTGGGGTGTGTTATCCCCTAATAGCATGGTGTGTGCACTTGAAGGGACCTCTGTTTGTGTCTGCTTTTAGTCCTCTAATGCTTGTGCTAGTGGCCCTAAGTGGGTCCTTAGTACTAGATGAGTATATTACCATTGGAAGTCTATTAGGAGCAGTGTTGATTGTGTGCGGATTGTACATGTTGTTATGGGGAAAAAGCAAAGAAACAAGGAAGGCAAAGAGTGAGATAGTGTGCGCAAATGTCTCTGTTGAATGTGATTCAATCCAAATTTGCAACCAAAAGGAGCATGACAAGAAGATCACAGCAAGTGTTGCCCCCTACTCAAGTGTCAACAATTCTTTAGGCGAAATTCAACAATTAAAGATTTGA 804 0.4378 MAVSLRLEKPNLGTHAGKAKLLGTITAIGGAMILTLYEGRRIFNWSIHVDLFQHAAPSPESATSGSRLWGFMLALVTPVSYSLWLIIQTKMSEKFPWHYSIAALTSIMGAIQSIIFALCTERDWSQWKLDWNLRLLVAASSGILVSGVCYPLIAWCVHLKGPLFVSAFSPLMLVLVALSGSLVLDEYITIGSLLGAVLIVCGLYMLLWGKSKETRKAKSEIVCANVSVECDSIQICNQKEHDKKITASVAPYSSVNNSLGEIQQLKI. 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05289 267 Pfam EamA-like transporter family 68 207 IPR000620 GO:0016020
Seca12g05289 267 PANTHER WAT1-RELATED PROTEIN 1 218 IPR030184 GO:0016020|GO:0022857
Seca12g05289 267 SUPERFAMILY Multidrug resistance efflux transporter EmrE 127 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05289 Seca-Chr12 142506637 142511207 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05289 1 259 Nodulin-like Gene Family AT1G25270 37.692 8.01e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05289 - - psat:127105848 362.073