Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05286 ATGAAGGATGCTAATATTGTATTGCAAAGGTTGAAACCAGACATCCTAATGGTGTTTGCGCAGATTGCATTTGCGGCGGTGAATATCATATACAAACTCGCCATTAATGATGGAATGAGTATGAGAGTCGCCACTGCTTATCGCCTCATTTGTGCATCGGCTTTCACTGTTCCCGTTGCTCTTATCTTTGATAGCAGGAAGAGACCAAAGATTACTTGGAGTGTGCTTTCTAAGGCATTTCTATGTGGATTATTTGGGGGAAGTTTATACCTAAACCTTTACCTTGAGGCCCTGGCTTTGACATCGGCAACGTTTATGTTGGCCGTGGTCAACCTTATTCCGGCTATTACCTTCATCATGGCTGTAACTTCCGGGTTGGACAAATTAAATTTGGGAGTAGCAGCAGGAAGGGCCAAGGTAATAGGAACAATAATGGGGATTAGTGGGGCAATGATTATGACCTTTTTCAAAGGCCTAGAAATTAATATTTGGTCTTCCAATATCAACCTTTTACATCCACATCCAAATCAAAATGGACACGTGGCATCACGACACGCAGACTTTCGTAGTAAACTATTGGGTGTTCCAATGGCCTTAGTCAGCAGCTGCTCTTTTTCTTTGTGGTTCATCATTCAGGCCAAGTTGAATCAGGAATACCCAAGCCCTCACTCAAGTGCAGCTTTAATGTCCACAATGGGAGCAATTCAGGCTACTGTTATTGCTCTTTGTGTTGATAGAGATTGGAGCCAATGGAAGCTGAATAGCAATATCAGGCTTCTAACTGTCATCTATCCGGGGATTGTGGTGTCTGGATTAGTGGTTATGGTTATTGCCTGGTGCATAAGAATGAGAGGCCCTCTGTTTGCCTCTGTTTTCAATCCTCTACAACTTTTGCTTGTGGCTATCGCTGCTTATTTGTTGTTGGATGAGAAATTGTATTTAGGATGTGTGCTTGGATCAGTGATGATTGTATGCGGTCTCTACGCGGTGCTTTGGGGTCAAGGCAAAGAAATGAAAAACAAGAAGACTCAGTTAGTGCCATTAGAAATCACTAAAGAATCTGAAAATGTTGAGCTTGTTGTTGTGTCCACTCTTGTAGATCAAGCTAAAGGTGTCCAAAACTACCCCAATAAAGCCACTGCTACCGGGAATATTAATAATAGTATGAAATGA 1173 0.4211 MKDANIVLQRLKPDILMVFAQIAFAAVNIIYKLAINDGMSMRVATAYRLICASAFTVPVALIFDSRKRPKITWSVLSKAFLCGLFGGSLYLNLYLEALALTSATFMLAVVNLIPAITFIMAVTSGLDKLNLGVAAGRAKVIGTIMGISGAMIMTFFKGLEINIWSSNINLLHPHPNQNGHVASRHADFRSKLLGVPMALVSSCSFSLWFIIQAKLNQEYPSPHSSAALMSTMGAIQATVIALCVDRDWSQWKLNSNIRLLTVIYPGIVVSGLVVMVIAWCIRMRGPLFASVFNPLQLLLVAIAAYLLLDEKLYLGCVLGSVMIVCGLYAVLWGQGKEMKNKKTQLVPLEITKESENVELVVVSTLVDQAKGVQNYPNKATATGNINNSMK. 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05286 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 336 - -
Seca12g05286 390 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Seca12g05286 390 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Seca12g05286 390 PANTHER WAT1-RELATED PROTEIN 15 342 IPR030184 GO:0016020|GO:0022857
Seca12g05286 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05286 Seca-Chr12 142309480 142317306 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05286 11 359 Nodulin-like Gene Family AT1G25270 40.115 1.20e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05286 - - gsj:114424758 528.865