Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05277 ATGAAGTCGGATACATGGAAACCAGCCTTGCTAATGGTGGCTGTGCAGATCACATTTTCTGCTTGCAATGTTATCTACAAACTTGCCATAAATGATGGAATGAGCACCATTGTCATTGCAGCTTACCGTATGGCCTTCGCAGCGCTTACCACTATTCCTCTTGCTCTTATTTTTGAGAGGCACAAGAGACCGAAGATGACTTGGAGGGTGTTTTTGTTGTCAAATCTCAGTGGACTATTTGTCAGAACTTCATTTCAAAACCTGTTCTATGGGGCCCTGGTTTTTACATCATCAGCAACACTTGTGTCCACAATCTACAACCTTATTCCCACTATGACCTTTATCTTAGCTGTTTCCTTCGGTTTGGAAAAATTAAATTGGAGAGCAGCATCAGGAAAGGCCAAGGTGATAGGAACTTTACTTGGACTTGCCGGGGCATTGCTTCTTATATTTTACAAAGGAATAGAATTTGATATTTGGCCATTTTATGTCAACCTTTTGGACCAAAATGGGCAATTGCCAGATACTACTAATGATTTGTTGGGTGTTGTATGCGTCGTACTAAGCTGCCTCTGTTTCTCTTTGTGGCTCATCATTCAGGCTAAGATCAGTGAAGCATACCCATGCCCTCAGTCAAGCATAGCTTTGATATCTACAATTGCAACAGTGCAATGTGTTATTTTAGGGTTTATTGTTGACAACGATTTGAACCAATGGAGACTTGATTGGGATATTAGGCTCATCACTGTGCTTTTTTCGGGAATTTTAGCCTCCGGATTAATATTCCTTGTCATTCAATGGGTGGTACAGACGAAAGGGCCTTTATTTGCTTCGGCTTTCAACCCTCTAATGCTTTTGATTGTGGCTGTCGTCGCTTCTATGCTGTTGGATGAGAAGTTAAATTTAGGAAGTGTGCTAGGAGGATTGCTGATTGTTTGTGGCCTATACACGGTGATATGGGGTAAGAGCAGAGAAGCGCAGAAGAATGCTCATGAATTAGAGCCACCAGAAATATTTGGAGATTCAGAAGCAACAAGGTCGTTGTTAAATCCATGA 1056 0.4157 MKSDTWKPALLMVAVQITFSACNVIYKLAINDGMSTIVIAAYRMAFAALTTIPLALIFERHKRPKMTWRVFLLSNLSGLFVRTSFQNLFYGALVFTSSATLVSTIYNLIPTMTFILAVSFGLEKLNWRAASGKAKVIGTLLGLAGALLLIFYKGIEFDIWPFYVNLLDQNGQLPDTTNDLLGVVCVVLSCLCFSLWLIIQAKISEAYPCPQSSIALISTIATVQCVILGFIVDNDLNQWRLDWDIRLITVLFSGILASGLIFLVIQWVVQTKGPLFASAFNPLMLLIVAVVASMLLDEKLNLGSVLGGLLIVCGLYTVIWGKSREAQKNAHELEPPEIFGDSEATRSLLNP. 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05277 351 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Seca12g05277 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 324 - -
Seca12g05277 351 Pfam EamA-like transporter family 8 150 IPR000620 GO:0016020
Seca12g05277 351 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
Seca12g05277 351 PANTHER WAT1-RELATED PROTEIN 7 326 IPR030184 GO:0016020|GO:0022857
Seca12g05277 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05277 Seca-Chr12 142037240 142043091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05277 7 327 Nodulin-like Gene Family AT1G25270 40.123 9.29e-82 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05277 - - mtr:25493309 504.212