Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05274 ATGAAGAACAAGTGGGATACGTGTATACCAGCCTTGCTAATGGTGACAGTGCAGATTGTATATTCTGGTTGCAATGTGATCTACAAGCTTGCCGCAAATGATGGAATGAGTACTATTGTCATTGCAGCATACCGTTTGGCCTTCGCAGCTGTTACCACTATTCCTCTTGCTCTTATTTTTGAAAGAACAAACATTATAGCTTCTCTAAAGTTGTTTTACGTACATTTTCTTCTTCTTCATCTGCAATACAGGGAGAGACCAAAGATGACTTGGAGGGTATTTTTCATGGCATTTCTAAGTGGACTATTGGTTGGAACTTTATTTCAAAACCTATTCTTCGGTGCCCTGGTTTTGACATCAGCAACCCTTGTGTCCGCCATCTACAACCTTATTCCCACCATGACCTTTATCTTAGCTGTATCATTCGGCTTTGAAAAATTAAATTGGGGAGCAGCATCAGGAAAGGCCAAGGTGATAGGTACTTTACTTGGACTTGTTGGGGCAATGCTGCTGACATTTTACAAAGGAGTAGAATTTGATATTTGGCCCTTTTATATCAACCTTTTGGATCCACAGCAAAACCAAAATGGACACGTGGCTGATACAAGTAGTGAATTATTGGGTGTTCTATTTGTTGTAATAGGCTGCTTCTGTTTCTCTTTGTGGCTCATCCTTCAGGCTAAAATGATGGAAGAATACCCATGTCCTATATCAAGCGTAGCTATGCTATCTACAATATCAACAATACAATGCGTTATTTTTGGTTTTATTGTTGAGAGGGATTTGAACGATTGGAAATTGGGTTGGAATATCAGGCTCCTAACCGTCCTTTTTGCGGGAGTTTTGGCCTCCGGATTAATGATTCTTGCCACTGGATGGGTTGTACAGAAGAAAGGGCCTTTATTTACGTCGGCTTTCAACCCTCTAATGCTTTTGATTGTGGCCGTCGTTGCTTCTATGCTGTTGGATGAGAAATTAAATTTAGGAAGTGTGCTAGGAGGAGTGCTGATTGTGTGTGGCCTGTACTTGGTGCTATGGGGTAAGAACAAAGAAATGCAAAATAAGACTCTGAGAGAGACACTAGAAATCAGTGGAGATTCCGAAGCTACGAGGCCATTGCTAAATCCATGA 1131 0.4103 MKNKWDTCIPALLMVTVQIVYSGCNVIYKLAANDGMSTIVIAAYRLAFAAVTTIPLALIFERTNIIASLKLFYVHFLLLHLQYRERPKMTWRVFFMAFLSGLLVGTLFQNLFFGALVLTSATLVSAIYNLIPTMTFILAVSFGFEKLNWGAASGKAKVIGTLLGLVGAMLLTFYKGVEFDIWPFYINLLDPQQNQNGHVADTSSELLGVLFVVIGCFCFSLWLILQAKMMEEYPCPISSVAMLSTISTIQCVIFGFIVERDLNDWKLGWNIRLLTVLFAGVLASGLMILATGWVVQKKGPLFTSAFNPLMLLIVAVVASMLLDEKLNLGSVLGGVLIVCGLYLVLWGKNKEMQNKTLRETLEISGDSEATRPLLNP. 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05274 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 269 350 - -
Seca12g05274 376 PANTHER WAT1-RELATED PROTEIN 10 355 IPR030184 GO:0016020|GO:0022857
Seca12g05274 376 Pfam EamA-like transporter family 11 172 IPR000620 GO:0016020
Seca12g05274 376 Pfam EamA-like transporter family 207 345 IPR000620 GO:0016020
Seca12g05274 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 76 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05274 Seca-Chr12 141802561 141816535 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05274 14 368 Nodulin-like Gene Family AT1G25270 35.556 2.37e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05274 - - mtr:25493309 525.013