Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05270 ATGATAGGTCCAGTGTTTGTATCAGCTTTCAACCCTCTTTACCTTGTTCTTGTGGTTGTTGCTACTTCTATGTTGTTAGATGAAAACCTATACGTAGGAAGTGTGATTGGAGTAGTGTTAGTTGTGTGTGGCTTGTATATGGTGTTATGGGGTAACAGCAAAGAAACTAAAAAGGCGACAACCTTGGTGTCATCAGAATTAGAAGAAGCGACTAACGTTGTTGTCATATCTACAACAATAGATCATGACAATAGTGACCGCAACAACAATATATGTAAAGACTGA 285 0.3825 MIGPVFVSAFNPLYLVLVVVATSMLLDENLYVGSVIGVVLVVCGLYMVLWGNSKETKKATTLVSSELEEATNVVVISTTIDHDNSDRNNNICKD. 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05270 94 PANTHER WAT1-RELATED PROTEIN 3 61 IPR030184 GO:0016020|GO:0022857
Seca12g05270 94 SUPERFAMILY Multidrug resistance efflux transporter EmrE 2 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05270 Seca-Chr12 141690425 141690850 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05270 3 55 Nodulin-like Gene Family AT5G13670 58.491 1.18e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05270 - - lja:Lj4g3v0336030.1 109.768