Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05269 ATGGATGGTAAGGTGTTGGGAACAATAGTTGGACTTAGCGGGTCAATGCTTCTTACATTATTCAAAGGTGCACAAATTAACATTTGGACCTTCTACATTAATCTTTTGCATCACAATCAACATAGCCACGTAGGAACACCGAATCATGACCATAGAAGAATATTGCTTTGTGTTTTATGTGGTTTTGGATGTTGCTTCAGTTTTTCAATATGGCTCATTATTCAGGCTAAGATGAGCAAAGAATATCCAAGTGATTACTCAGGCACAACATTGATGATCTTAATGGGAGCAATACAATCCATTGCCTTTGCCCTTTGTTTTGAGAAGGGTTGGAGTCAATGGAAGTTGGGTTTAAATATTAGGACTCTTAATGCATCTTATTCGGGTTGTGGTGATGTTGAAATTCTGGCAAGCGTACCAAAACCTCAGCAGTATAATAAAGTTGGAAAGCTATCTGAAATCTGGAAGGAATCTAATTTGAAATCTTTTGAAAAACTGATTCGTATTCCTGCGCTTCATCCTGCGCTCAGCGCGTTTGAAGCGCAGGATCCAGAGAGCAACTTTTAA 567 0.388 MDGKVLGTIVGLSGSMLLTLFKGAQINIWTFYINLLHHNQHSHVGTPNHDHRRILLCVLCGFGCCFSFSIWLIIQAKMSKEYPSDYSGTTLMILMGAIQSIAFALCFEKGWSQWKLGLNIRTLNASYSGCGDVEILASVPKPQQYNKVGKLSEIWKESNLKSFEKLIRIPALHPALSAFEAQDPESNF. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05269 188 PANTHER WAT1-RELATED PROTEIN 4 130 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05269 Seca-Chr12 141675230 141678009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05269 3 129 Nodulin-like Gene Family AT1G68170 34.646 8.22e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05269 - - lja:Lj4g3v0336250.1 159.458